RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GLIS1Q8NBF1 620 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 FDCSPQ8NFU4 85 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 ASZ1Q8WWH4 475 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 C17orf62Q9BQA9 187 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 AP1M1Q9BXS5 423 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 PAK5Q9P286 719 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 GUCA1BQ9UMX6 200 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 CDYLQ9Y232 598 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 PADI2Q9Y2J8 665 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 TCAF1Q9Y4C2 921 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 ZNF451Q9Y4E5 1061 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 PCDHGB7Q9Y5F8 929 aa15.64■□□□□ 0.09
SNX1-213ENST00000561026 USP9XQ93008 2570 aaPredicted RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 TNRC6AQ8NDV7 1962 aaKnown RBP15.64■□□□□ 0.09
SNX1-213ENST00000561026 PRRC2CQ9Y520 2896 aaKnown RBP15.63■□□□□ 0.09
SNX1-213ENST00000561026 ISM1B1AKI9 464 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 ZNF185O15231 689 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 KRT86O43790 486 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 GPC4O75487 556 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 ZSCAN5DPP0CG00 497 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 CBSLP0DN79 551 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 PEBP1P30086 187 aaKnown RBP15.63■□□□□ 0.09
SNX1-213ENST00000561026 CBSP35520 551 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 RAB28P51157 221 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 HSPA14Q0VDF9 509 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 SLC5A12Q1EHB4 618 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 VRK3Q8IV63 474 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 DNAJC22Q8N4W6 341 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 PROKR1Q8TCW9 393 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 GBP5Q96PP8 586 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 CARD6Q9BX69 1037 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 TSSK1BQ9BXA7 367 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 CHRAC1Q9NRG0 131 aa15.63■□□□□ 0.09
SNX1-213ENST00000561026 USP9YO00507 2555 aaPredicted RBP15.63■□□□□ 0.09
SNX1-213ENST00000561026 IQCF5A8MTL0 148 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 ZSCAN9O15535 394 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 APOA4P06727 396 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 CTSBP07858 339 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 PKLRP30613 574 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 RPL22P35268 128 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 RRADP55042 308 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 DCDP81605 110 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 ATP1A4Q13733 1029 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 SSPNQ14714 243 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 KYNUQ16719 465 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 AARS2Q5JTZ9 985 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 PCID2Q5JVF3 399 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 MEI1Q5TIA1 1274 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 C1orf189Q5VU69 101 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 MLIPQ5VWP3 458 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 TLDC1Q6P9B6 456 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 LDB1Q86U70 411 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 RAB43Q86YS6 212 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 ZNF655Q8N720 491 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 LINC01555Q8NAE3 123 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 PPHLN1Q8NEY8 458 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 CPT1CQ8TCG5 803 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 LKAAEAR1Q8TD35 194 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 MENTQ9BUN1 341 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 NUDT9Q9BW91 350 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 DHCR7Q9UBM7 475 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 ANAPC5Q9UJX4 755 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 G3BP2Q9UN86 482 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 SRPK3Q9UPE1 567 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 PLCL2Q9UPR0 1127 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 A6NL46 340 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 PRMT5O14744 637 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 VPS4BO75351 444 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 SORBS2O94875 1100 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 SLCO2B1O94956 709 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 RPN2P04844 631 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 CD63P08962 238 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 AOAHP28039 575 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 SIX1Q15475 284 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 CCNG2Q16589 344 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 DRICH1Q6PGQ1 229 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 HPS6Q86YV9 775 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 FAM20CQ8IXL6 584 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 KRT222Q8N1A0 295 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 EFCAB3Q8N7B9 438 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 GALNT11Q8NCW6 608 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 CFAP61Q8NHU2 1237 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 IP6K3Q96PC2 410 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 EIF2B3Q9NR50 452 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 CATSPERZQ9NTU4 200 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 MARCH4Q9P2E8 410 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 GPN3Q9UHW5 284 aaPredicted RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 VPS4AQ9UN37 437 aa15.62■□□□□ 0.09
SNX1-213ENST00000561026 DRG1Q9Y295 367 aaKnown RBP15.62■□□□□ 0.09
SNX1-213ENST00000561026 CD3EAPO15446 510 aaKnown RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 DPM1O60762 260 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 MAGP20916 626 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 CD9P21926 228 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 OTX2P32243 289 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 TTPAP49638 278 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 SESN2P58004 480 aaPredicted RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 GRB7Q14451 532 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 JMJD6Q6NYC1 403 aaPredicted RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 UNC5DQ6UXZ4 953 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms