RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 GALNT18Q6P9A2 607 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TMEM92Q6UXU6 159 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TRIM46Q7Z4K8 759 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 MIB1Q86YT6 1006 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PSMA8Q8TAA3 256 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ERLEC1Q96DZ1 483 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CFAP36Q96G28 342 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 LIN37Q96GY3 246 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 FCRL3Q96P31 734 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 ATOH8Q96SQ7 321 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 UHRF1Q96T88 793 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CDC6Q99741 560 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 RTKNQ9BST9 563 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 HAUS8Q9BT25 410 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 DDA1Q9BW61 102 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SLC17A9Q9BYT1 436 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SLC13A1Q9BZW2 595 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TRIM4Q9C037 500 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 LMAN1LQ9HAT1 526 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 TMPRSS4Q9NRS4 437 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SYBUQ9NX95 663 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 OR6C2Q9NZP2 312 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 C6orf203Q9P0P8 240 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CPNE7Q9UBL6 633 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
ZEB1-219ENST00000560721 SPO11Q9Y5K1 396 aa5.3□□□□□ -1.56
ZEB1-219ENST00000560721 PTPRBP23467 1997 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 TTC34A8MYJ7 566 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 E2F3O00716 465 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 FPGTO14772 594 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SMAD6O43541 496 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 KLHL41O60662 606 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 TOP3BO95985 862 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 RAB40ALP0C0E4 278 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SMIM18P0DKX4 95 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 C6P13671 934 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 PKMP14618 531 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 RAB10P61026 200 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 IGLV3-21P80748 117 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 MED21Q13503 144 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 CUL3Q13618 768 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SCYL2Q6P3W7 929 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 BORAQ6PGQ7 559 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 IKBIPQ70UQ0 350 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 KCNMB4Q86W47 210 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 DND1Q8IYX4 353 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 PGBD3Q8N328 593 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 FLCNQ8NFG4 579 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 OR5K2Q8NHB8 316 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ZUFSPQ96AP4 578 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SLC22A18Q96BI1 424 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GBP5Q96PP8 586 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ZNF382Q96SR6 550 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GSDMCQ9BYG8 508 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SPRY4Q9C004 299 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GPATCH2LQ9NWQ4 482 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 B4GALT6Q9UBX8 382 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 RAB26Q9ULW5 256 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 APOBEC2Q9Y235 224 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 PCDHGA6Q9Y5G7 932 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 MAD1L1Q9Y6D9 718 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 IGLV3-12A0A075B6K2 115 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SYNCRIPO60506 623 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GRAP2O75791 330 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 APRTP07741 180 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 TGM1P22735 817 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ABCE1P61221 599 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SLC25A3Q00325 362 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 TBL3Q12788 808 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 BMPR2Q13873 1038 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 SHBQ15464 509 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ATG9BQ674R7 924 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ZCCHC8Q6NZY4 707 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 CHSY3Q70JA7 882 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ST13P4Q8IZP2 240 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 OR4C6Q8NH72 309 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 NAT14Q8WUY8 206 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 BMFQ96LC9 184 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ZNF578Q96N58 590 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ARPC5LQ9BPX5 153 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ROGDIQ9GZN7 287 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 VCX3AQ9NNX9 186 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 NT5MQ9NPB1 228 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 POLR3BQ9NW08 1133 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 PADI4Q9UM07 663 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 PRPF19Q9UMS4 504 aaKnown RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GOLGA8QA0A0J9YX86 632 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GOLGA8OA6NCC3 632 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GOLGA8NF8WBI6 632 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 G3V2L1 256 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 H0YJX3 145 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 FLRT2O43155 660 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ITGA2BP08514 1039 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 UBTFL6P0CB48 400 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 GIMD1P0DJR0 217 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 CD1DP15813 335 aa5.29□□□□□ -1.56
ZEB1-219ENST00000560721 ZNF37AP17032 561 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-219ENST00000560721 CTSOP43234 321 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms