RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SASH3O75995 380 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 CLDN7O95471 211 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TRBC1P01850 177 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 NUDT17P0C025 328 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ZSCAN5DPP0CG00 497 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 DRD2P14416 443 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ZNF7P17097 686 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TPSB2P20231 275 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 CA5AP35218 305 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 FDFT1P37268 417 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 HADHAP40939 763 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 FOLR3P41439 243 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TSFMP43897 325 aaKnown RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MMP13P45452 471 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 IFI35P80217 286 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 WASHC5Q12768 1159 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 KCNJ11Q14654 390 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 SSPNQ14714 243 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TRIP13Q15645 432 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TPSAB1Q15661 275 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ZNF630Q2M218 657 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 PLEKHS1Q5SXH7 462 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MARC1Q5VT66 337 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 LCN10Q6JVE6 187 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 LRIG3Q6UXM1 1119 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 RPTNQ6XPR3 784 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 CERS6Q6ZMG9 384 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 PPP1R21Q6ZMI0 780 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TRMT10CQ7L0Y3 403 aaKnown RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 GSPT2Q8IYD1 628 aaKnown RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ATPAF2Q8N5M1 289 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 BCORP1Q8N888 145 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 SLC38A9Q8NBW4 561 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MAML1Q92585 1016 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MAGEB10Q96LZ2 347 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 DPH2Q9BQC3 489 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TIMM29Q9BSF4 260 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 DHRS4Q9BTZ2 278 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 SPATA16Q9BXB7 569 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TRIM8Q9BZR9 551 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ACBD3Q9H3P7 528 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ACTR5Q9H9F9 607 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 HAUS2Q9NVX0 235 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 SEMA5BQ9P283 1151 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 CNOT6Q9ULM6 557 aaKnown RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 TTLL3Q9Y4R7 772 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MTORP42345 2549 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 FER1L5A0AVI2 2057 aa9.03□□□□□ -0.96
SMAD3-215ENST00000560424 MDC1Q14676 2089 aaKnown RBP9.03□□□□□ -0.96
SMAD3-215ENST00000560424 ZGRF1Q86YA3 2104 aa9.02□□□□□ -0.96
SMAD3-215ENST00000560424 PKDREJQ9NTG1 2253 aa9.02□□□□□ -0.96
SMAD3-215ENST00000560424 ABCA2Q9BZC7 2435 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ERI2A8K979 691 aaKnown RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 FADS2P1A8MWK0 482 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 TMEM150CB9EJG8 249 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 MATN3O15232 486 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PRICKLE3O43900 615 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PDHA1P08559 390 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ATXN8OSP0DMR3 200 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 MLNP12872 115 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ETS1P14921 441 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 DHX9Q08211 1270 aaKnown RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF169Q14929 603 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 TLR1Q15399 786 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 HIF1AQ16665 826 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PARP6Q2NL67 630 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PTCHD3Q3KNS1 767 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 TEX44Q53QW1 395 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ANKRD20A2Q5SQ80 823 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 HENMT1Q5T8I9 393 aaKnown RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ANKRD20A1Q5TYW2 823 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PRAMEF17Q5VTA0 474 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ANKRD20A3Q5VUR7 823 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 MLIPQ5VWP3 458 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ARMC3Q5W041 872 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 B3GNTL1Q67FW5 361 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-215ENST00000560424 FAM198BQ6UWH4 519 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 ABRAXAS1Q6UWZ7 409 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PGBD5Q8N414 524 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 RELTQ969Z4 430 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 LRRC39Q96DD0 335 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 TRIM39Q9HCM9 518 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 PCMTD2Q9NV79 361 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 HRASLS2Q9NWW9 162 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 NDOR1Q9UHB4 597 aa9.02□□□□□ -0.97
SMAD3-215ENST00000560424 AKAP9Q99996 3911 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 OR5K3A6NET4 321 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CCL21O00585 134 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SUN1O94901 812 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 PEX11BO96011 259 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ABHD2P08910 425 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CD63P08962 238 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 HBQ1P09105 142 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CDH3P22223 829 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 PTPN3P26045 913 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms