RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CCSMST1Q4G0I0 132 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 LRRC8EQ6NSJ5 796 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 FAM92BQ6ZTR7 304 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CARFQ8N187 725 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 BMPERQ8N8U9 685 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 LINC01555Q8NAE3 123 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 FLVCR1-AS1Q8TAF5 88 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 RAD51AP1Q96B01 352 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 RBBP8Q99708 897 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 AKAP7Q9P0M2 348 aaPredicted RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 TSR3Q9UJK0 312 aaKnown RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CDRT15L2A8MXV6 281 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 B4E171 279 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 RASGRF2O14827 1237 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 WISP3O95389 354 aaPredicted RBP16.3■□□□□ 0.2
RPL28-209ENST00000560055 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 CHRM5P08912 532 aaPredicted RBP16.3■□□□□ 0.2
RPL28-209ENST00000560055 JMJD7P0C870 316 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 FGF3P11487 239 aaPredicted RBP16.3■□□□□ 0.2
RPL28-209ENST00000560055 PHBP35232 272 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 ETV5P41161 510 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 TSPAN7P41732 249 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 TAS2R39P59534 338 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 PRKAA1Q13131 559 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 PDAP1Q13442 181 aaKnown RBP16.3■□□□□ 0.2
RPL28-209ENST00000560055 EFTUD2Q15029 972 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■■□□ 17.1
RPL28-209ENST00000560055 CACHD1Q5VU97 1274 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 ARMC6Q6NXE6 501 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 TMEM207Q6UWW9 146 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 CTAGE3PQ8IX95 158 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 MAGEC3Q8TD91 643 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 DENND1AQ8TEH3 1009 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 EEF1AKMT1Q8WVE0 214 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 UBXN4Q92575 508 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 ELMO2Q96JJ3 720 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 SLC41A2Q96JW4 573 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 GPR22Q99680 433 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 TXLNGYQ9BZA5 131 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 ACSS3Q9H6R3 686 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 OCIAD1Q9NX40 245 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 SIDT1Q9NXL6 827 aaKnown RBP16.3■□□□□ 0.2
RPL28-209ENST00000560055 ACTR10Q9NZ32 417 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 TXNDC16Q9P2K2 825 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 PISDQ9UG56 409 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 CIDEBQ9UHD4 219 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 AHCTF1Q8WYP5 2266 aa16.3■□□□□ 0.2
RPL28-209ENST00000560055 IGHV5-51A0A0C4DH38 117 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 KRT87PA6NCN2 255 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 C2orf74A8MZ97 194 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 MYO1CO00159 1063 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 RASSF9O75901 435 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 TNFSF15O95150 251 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 ACSL3O95573 720 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 CATP04040 527 aaKnown RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 MYBL2P10244 700 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 ERGP11308 486 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 ZNF37AP17032 561 aaPredicted RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 PRDX3P30048 256 aaKnown RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 PEBP1P30086 187 aaKnown RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 RGS4P49798 205 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 ERVPABLB-1P60509 514 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 POU4F1Q01851 419 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 SLMAPQ14BN4 828 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 TBC1D25Q3MII6 688 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 GRTP1Q5TC63 336 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 TTC23LQ6PF05 361 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 CLEC14AQ86T13 490 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 CEP97Q8IW35 865 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 OR2L8Q8NGY9 312 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 HMGCLL1Q8TB92 370 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 DLG3Q92796 817 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 LINGO1Q96FE5 620 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 PPM1MQ96MI6 270 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 ZNF578Q96N58 590 aaPredicted RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 IL17FQ96PD4 163 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 OR2A14Q96R47 310 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 RAB11FIP5Q9BXF6 653 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 B3GNT4Q9C0J1 378 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 POPDC3Q9HBV1 291 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 SPHK1Q9NYA1 384 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 MTO1Q9Y2Z2 717 aaKnown RBP16.29■□□□□ 0.2
RPL28-209ENST00000560055 PCDHGA7Q9Y5G6 932 aa16.29■□□□□ 0.2
RPL28-209ENST00000560055 PIPSLA2A3N6 862 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 GSAPA4D1B5 854 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 EFCAB7A8K855 629 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 AGRPO00253 132 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 FAM155BO75949 473 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
RPL28-209ENST00000560055 NELFEP18615 380 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms