RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 SMIM18P0DKX4 95 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 TCF3P15923 654 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 NCK1P16333 377 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 EPORP19235 508 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 HIST1H2ADP20671 130 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 FASP25445 335 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 NFKBIAP25963 317 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 NNMTP40261 264 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 KRT6CP48668 564 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 HNMTP50135 292 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 PRKCQQ04759 706 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 SP140Q13342 867 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 PWP1Q13610 501 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 BOP1Q14137 746 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 GK3PQ14409 553 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 CYP51A1Q16850 503 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 AAK1Q2M2I8 961 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 SGO1Q5FBB7 561 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 CACHD1Q5VU97 1274 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 PPP4R4Q6NUP7 873 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 GPR153Q6NV75 609 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 GET4Q7L5D6 327 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 PROSER1Q86XN7 944 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 VRK3Q8IV63 474 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 CHERPQ8IWX8 916 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 SORCS1Q8WY21 1168 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 SCAMP4Q969E2 229 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 HIST1H2AHQ96KK5 128 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 TSC22D3Q99576 134 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 CGREF1Q99674 301 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 HIST1H2AJQ99878 128 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 H2AFJQ9BTM1 129 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 ACTR8Q9H981 624 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
RABGGTA-212ENST00000559974 LRRK1Q38SD2 2015 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 MUC3AQ02505 3323 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 PABPN1LA6NDY0 278 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 UPK3BL1B0FP48 263 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 UPK3BL2E5RIL1 263 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 KPNA5O15131 536 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SLC16A5O15375 505 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SEC22BO75396 215 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 MTX2O75431 263 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 UMPSP11172 480 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 FCGR1AP12314 374 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 CKMT2P17540 419 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 PSMC3P17980 439 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SLC6A12P48065 614 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 MYBPC1Q00872 1141 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 GGTA1PQ4G0N0 100 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 ARSIQ5FYB1 569 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SERPINA13PQ6UXR4 307 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 LIX1Q8N485 282 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 GLB1L3Q8NCI6 653 aaPredicted RBP14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 TRPV3Q8NET8 790 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 NUDT8Q8WV74 236 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SLC13A3Q8WWT9 602 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 PPM1MQ96MI6 270 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 ZNF696Q9H7X3 374 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 ZFP14Q9HCL3 533 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 C1orf109Q9NX04 203 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SLC8A2Q9UPR5 921 aa14.12□□□□□ -0.15
RABGGTA-212ENST00000559974 SOCS2O14508 198 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 AP2A2O94973 939 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 KCNH1O95259 989 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 TIMP2P16035 220 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 CYP2A7P20853 494 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 HRH2P25021 359 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 TXNL4AP83876 142 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 TFF2Q03403 129 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 CPSF6Q16630 551 aaKnown RBP eCLIP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 ZXDCQ2QGD7 858 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 INTS11Q5TA45 600 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 Q6ZVL8 140 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 NEK10Q6ZWH5 1172 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 TRAM1L1Q8N609 369 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 PACRGLQ8N7B6 248 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 SMRP1Q8NCR6 262 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 OR8J3Q8NGG0 315 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 DPY30Q9C005 99 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 RAD18Q9NS91 495 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 NFKBIL1Q9UBC1 381 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 IL36AQ9UHA7 158 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 ZNHIT2Q9UHR6 403 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 MAGEL2Q9UJ55 1249 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 ANAPC2Q9UJX6 822 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 USP22Q9UPT9 525 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 MRPS23Q9Y3D9 190 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 PCDHB3Q9Y5E6 796 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 GFYI3L273 518 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 SLC9A3R1O14745 358 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 TPST1O60507 370 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 CTSLP07711 333 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 PABPC4LP0CB38 370 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 ETV3P41162 512 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 AP1S2P56377 157 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 OR4D2P58180 307 aa14.11□□□□□ -0.15
RABGGTA-212ENST00000559974 MTPNP58546 118 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms