RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 THOP1P52888 689 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SLC12A2P55011 1212 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NXPH1P58417 271 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SRP54P61011 504 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 POU4F1Q01851 419 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 HSPA14Q0VDF9 509 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TCF15Q12870 199 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 GTF2H3Q13889 308 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TSNQ15631 228 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 PHKG1Q16816 387 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 INSCQ1MX18 579 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 BCL7AQ4VC05 210 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PYCR3Q53H96 274 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TAF1BQ53T94 588 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 N4BP2L1Q5TBK1 243 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 AGBL2Q5U5Z8 902 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LYPLAL1Q5VWZ2 237 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CES4AQ5XG92 561 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SLC30A9Q6PML9 568 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SLC36A4Q6YBV0 504 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TIFABQ6ZNK6 161 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 RPS27LQ71UM5 84 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 TAOK1Q7L7X3 1001 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 BMP8AQ7Z5Y6 402 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 GALNT7Q86SF2 657 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CLEC14AQ86T13 490 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LRRTM4Q86VH4 590 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NRROSQ86YC3 692 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 GALNT13Q8IUC8 556 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LMNTD2Q8IXW0 634 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CFAP206Q8IYR0 622 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 RIBC1Q8N443 379 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB2Q8N680 514 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 BANPQ8N9N5 519 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 DENND6BQ8NEG7 585 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CFAP61Q8NHU2 1237 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TCP10LQ8TDR4 215 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SKA2Q8WVK7 121 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 PATE1Q8WXA2 126 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ASB12Q8WXK4 309 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PIGKQ92643 395 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 DLG3Q92796 817 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 KCNJ9Q92806 393 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NELL1Q92832 810 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 APOPT1Q96IL0 206 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SCYL1Q96KG9 808 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 RMDN2Q96LZ7 410 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 WDR92Q96MX6 357 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 GPR78Q96P69 363 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 FAM111AQ96PZ2 611 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 OR2M4Q96R27 311 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 C19orf43Q9BQ61 176 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CCM2Q9BSQ5 444 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LRFN3Q9BTN0 628 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LRRC61Q9BV99 259 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CCDC68Q9H2F9 335 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ALG9Q9H6U8 611 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 IL21RQ9HBE5 538 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TRIM39Q9HCM9 518 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 KCNK9Q9NPC2 374 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PRDM8Q9NQV8 689 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 GPR27Q9NS67 375 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 UCKL1Q9NWZ5 548 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 DNAJC28Q9NX36 388 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ZSCAN32Q9NX65 697 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TMEM216Q9P0N5 145 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CPSF2Q9P2I0 782 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 XPR1Q9UBH6 696 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 FETUBQ9UGM5 382 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 FBXO4Q9UKT5 387 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PLAGL1Q9UM63 463 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ASB1Q9Y576 335 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PCDHB1Q9Y5F3 818 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SNX11Q9Y5W9 270 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 FANCMQ8IYD8 2048 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 WDR87Q6ZQQ6 2873 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SPTY2D1-AS1A0A0U1RR47 76 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SLC5A10A0PJK1 596 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 WDR91A4D1P6 747 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 OR52A4PA6NMU1 304 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 UBXN8O00124 270 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TLR4O00206 839 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 BTN3A1O00481 513 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CASC3O15234 703 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 BCAT2O15382 392 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 VEGFDO43915 354 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 OPA1O60313 960 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 AP2A2O94973 939 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 FTH1P02794 183 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CFIP05156 583 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 LTA4HP09960 611 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 CD8BP10966 210 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 RALBP11234 206 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CD1DP15813 335 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 NR1D1P20393 614 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 FUT4P22083 530 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CNTFP26441 200 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CD38P28907 300 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CRABP2P29373 138 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ACTR1BP42025 376 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms