RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 LRRC6Q86X45 466 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
LRRC28-210ENST00000558879 LINC01555Q8NAE3 123 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 ADAMTS17Q8TE56 1095 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 MR1Q95460 341 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 PANX3Q96QZ0 392 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 ACTR5Q9H9F9 607 aaPredicted RBP16.43■□□□□ 0.22
LRRC28-210ENST00000558879 NEU2Q9Y3R4 380 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 JRKLQ9Y4A0 524 aa16.43■□□□□ 0.22
LRRC28-210ENST00000558879 E7EQ34 232 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 HCRTR1O43613 425 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 KLK3P07288 261 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-210ENST00000558879 CYP2A7P20853 494 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 RPS15P62841 145 aaKnown RBP16.42■□□□□ 0.22
LRRC28-210ENST00000558879 GBX1Q14549 363 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 TMED2Q15363 201 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 CTSL3PQ5NE16 218 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 SYTL1Q8IYJ3 562 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 LPGAT1Q92604 370 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 CLIP3Q96DZ5 547 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 TCTN2Q96GX1 697 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 BIRC8Q96P09 236 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 TRIM4Q9C037 500 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 FARSAQ9Y285 508 aaKnown RBP16.42■□□□□ 0.22
LRRC28-210ENST00000558879 TP53TG5Q9Y2B4 290 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 MAN2B2Q9Y2E5 1009 aa16.42■□□□□ 0.22
LRRC28-210ENST00000558879 ASH1LQ9NR48 2969 aaKnown RBP16.42■□□□□ 0.22
LRRC28-210ENST00000558879 MAP3K7O43318 606 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 RFPL1O75677 317 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 WISP1O95388 367 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 ZIC2O95409 532 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 KRT14P02533 472 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 RPN2P04844 631 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 OGNP20774 298 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 VPS41P49754 854 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 ADARP55265 1226 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 GPS1Q13098 491 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 TRIP13Q15645 432 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 DEFB110Q30KQ9 67 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 LACTB2Q53H82 288 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 ANKRD22Q5VYY1 191 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 PTRHD1Q6GMV3 140 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 TCTN3Q6NUS6 607 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 CAND1Q86VP6 1230 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 REXO1L1PQ8IX06 675 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 ENDOVQ8N8Q3 282 aaKnown RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 PBKQ96KB5 322 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 DPH2Q9BQC3 489 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-210ENST00000558879 NLNQ9BYT8 704 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 ANAPC2Q9UJX6 822 aa16.41■□□□□ 0.22
LRRC28-210ENST00000558879 SHANK1Q9Y566 2161 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 ISM1B1AKI9 464 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 KPNA5O15131 536 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 ZNF749O43361 778 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 NDUFS3O75489 264 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 VAPBO95292 243 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 HBQ1P09105 142 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 MLNP12872 115 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 CD9P21926 228 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 GCGRP47871 477 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 EIF3BP55884 814 aaKnown RBP16.4■□□□□ 0.22
LRRC28-210ENST00000558879 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
LRRC28-210ENST00000558879 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 RHBDD2Q6NTF9 364 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 CES3Q6UWW8 571 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 HOOK3Q86VS8 718 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 OR2L8Q8NGY9 312 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 MS4A14Q96JA4 679 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 TRIM55Q9BYV6 548 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 EPN3Q9H201 632 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 ZNF71Q9NQZ8 489 aaPredicted RBP16.4■□□□□ 0.22
LRRC28-210ENST00000558879 TCFL5Q9UL49 500 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 NBASA2RRP1 2371 aa16.4■□□□□ 0.22
LRRC28-210ENST00000558879 MKRN2OSH3BPM6 223 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 K7EM74 188 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 PGRMC1O00264 195 aaKnown RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 PRICKLE3O43900 615 aaPredicted RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 AVILO75366 819 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 S1PR4O95977 384 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 NR1D1P20393 614 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 MAGP20916 626 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 ATP5DP30049 168 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 COILP38432 576 aaPredicted RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 CASRP41180 1078 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 MAGEA3P43357 314 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 SARNPP82979 210 aaKnown RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 NCF4Q15080 339 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 PTCHD3Q3KNS1 767 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 CPZQ66K79 652 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 CCDC137Q6PK04 289 aaKnown RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 GPR135Q8IZ08 494 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 SLC35F6Q8N357 371 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 DNAJC22Q8N4W6 341 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 MAGOHBQ96A72 148 aaKnown RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 SERPINB12Q96P63 405 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 IL17FQ96PD4 163 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms