RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	IL11RA	Q14626	422 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	TAF1A	Q15573	450 aa	Predicted RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	GPR19	Q15760	415 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	LONRF2	Q1L5Z9	754 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	DNTTIP2	Q5QJE6	756 aa	Known RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	PRAMEF17	Q5VTA0	474 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	FAM69B	Q5VUD6	431 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	ZDHHC20	Q5W0Z9	365 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	CDKL3	Q8IVW4	592 aa	Predicted RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	SIDT2	Q8NBJ9	832 aa	Known RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	PHC3	Q8NDX5	983 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	OR4E2	Q8NGC2	313 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	C9orf43	Q8TAL5	461 aa	Predicted RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	DTX3L	Q8TDB6	740 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	SLC41A2	Q96JW4	573 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	RMDN2	Q96LZ7	410 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	C12orf66	Q96MD2	445 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	CATSPER2	Q96P56	530 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	CITED4	Q96RK1	184 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	TRIM56	Q9BRZ2	755 aa	Known RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	ACSS3	Q9H6R3	686 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	LRRC4C	Q9HCJ2	640 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	FGF21	Q9NSA1	209 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	PIH1D1	Q9NWS0	290 aa	Known RBP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	HRASLS2	Q9NWW9	162 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	EPHA6	Q9UF33	1036 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	SLC24A2	Q9UI40	661 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	PADI1	Q9ULC6	663 aa		6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	6.81	□□□□□ -1.32
MARK3-215	ENST00000558787	USP9X	Q93008	2570 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	TCRBV7S2A1N4T	A0A589	114 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	UBA6	A0AVT1	1052 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CCDC66	A2RUB6	948 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	GRID2IP	A4D2P6	1211 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	OR5K3	A6NET4	321 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	C5orf60	A6NFR6	353 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SLC9B1P1	A6NJY1	282 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	USP27X	A6NNY8	438 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	LDB2	O43679	373 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ZNF500	O60304	480 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	KCNJ13	O60928	360 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CREG1	O75629	220 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	DNAJB5	O75953	348 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	METTL18	O95568	372 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CTNNA2	P26232	953 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PDHA2	P29803	388 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	KPNA2	P52292	529 aa	Known RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ZNF140	P52738	457 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CHAF1B	Q13112	559 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	DNASE1L3	Q13609	305 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ITGA9	Q13797	1035 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	KRT33B	Q14525	404 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PRPSAP1	Q14558	356 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ITPRIPL1	Q6GPH6	555 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	LCN10	Q6JVE6	187 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PPP1R3B	Q86XI6	285 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	RP1L1	Q8IWN7	2480 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	RBM12B	Q8IXT5	1001 aa	Known RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CLDN19	Q8N6F1	224 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	FAM71D	Q8N9W8	422 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SLC38A9	Q8NBW4	561 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	OR2L2	Q8NH16	312 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	UBXN4	Q92575	508 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	DCUN1D1	Q96GG9	259 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	DNAJC1	Q96KC8	554 aa	Known RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SPATA13	Q96N96	652 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	FERD3L	Q96RJ6	166 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	TBL1Y	Q9BQ87	522 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	EFHD1	Q9BUP0	239 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	TWSG1	Q9GZX9	223 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	RAB33B	Q9H082	229 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	KLHL25	Q9H0H3	589 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ACTL8	Q9H568	366 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	XKR8	Q9H6D3	395 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PDE7B	Q9NP56	450 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	NPHS2	Q9NP85	383 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	LHX9	Q9NQ69	397 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SMOX	Q9NWM0	555 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SEMA5B	Q9P283	1151 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	CRLS1	Q9UJA2	301 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	RARRES3	Q9UL19	164 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ACSL5	Q9ULC5	683 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PACSIN2	Q9UNF0	486 aa	Predicted RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	PLAA	Q9Y263	795 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	TP53TG5	Q9Y2B4	290 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	R3HDM2	Q9Y2K5	976 aa	Known RBP	6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	JRKL	Q9Y4A0	524 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	SPTB	P11277	2137 aa		6.8	□□□□□ -1.32
MARK3-215	ENST00000558787	ZNF106	Q9H2Y7	1883 aa	Known RBP	6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	DOPEY2	Q9Y3R5	2298 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	BTN3A3	O00478	584 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	STK10	O94804	968 aa	Known RBP	6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	CRTAM	O95727	393 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	FTCD	O95954	541 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	SLC35G4	P0C7Q5	338 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	ATP1B2	P14415	290 aa	Predicted RBP	6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	PVR	P15151	417 aa		6.79	□□□□□ -1.32
MARK3-215	ENST00000558787	MC4R	P32245	332 aa		6.79	□□□□□ -1.32

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