RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 NELFEP18615 380 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 PRDX3P30048 256 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 CCNFP41002 786 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 EIF2S3P41091 472 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 TSPAN7P41732 249 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 RAB28P51157 221 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 RAB15P59190 212 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 TIAL1Q01085 375 aaKnown RBP eCLIP15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 MC2RQ01718 297 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 CBLBQ13191 982 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 GRB7Q14451 532 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 KYNUQ16719 465 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 HECTD2Q5U5R9 776 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 LRRC69Q6ZNQ3 347 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 SLC26A11Q86WA9 606 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 ZFAND4Q86XD8 727 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 CTAGE3PQ8IX95 158 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 LRRN4CLQ8ND94 238 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 EEF1AKMT1Q8WVE0 214 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 KCNE4Q8WWG9 221 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 KLHL6Q8WZ60 621 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 RAD51AP1Q96B01 352 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 RHOXF2Q9BQY4 288 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 SIDT1Q9NXL6 827 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 NSMCE4AQ9NXX6 385 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 OR6C2Q9NZP2 312 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 TXNDC16Q9P2K2 825 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 ACACBO00763 2458 aa15.35■□□□□ 0.05
RABGGTA-206ENST00000558649 FAM95CA0A1B0GW59 222 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 ARHGEF33A8MVX0 844 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CXorf49A8MYA2 514 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 RASGRF2O14827 1237 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 POLR1CO15160 346 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 ZBTB11O95625 1053 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 SYF2O95926 243 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CATP04040 527 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CBSLP0DN79 551 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CBSP35520 551 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 HSD11B2P80365 405 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 TUBB3Q13509 450 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 FAM45BPQ6NSW5 357 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 PAQR3Q6TCH7 311 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 SPESP1Q6UW49 350 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CEACAM20Q6UY09 585 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 RAB42Q8N4Z0 105 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 LINC01555Q8NAE3 123 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 FAM45AQ8TCE6 357 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 MAGEC3Q8TD91 643 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 LINGO1Q96FE5 620 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 OLFM1Q99784 485 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 MENTQ9BUN1 341 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 DDA1Q9BW61 102 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 RAB11FIP5Q9BXF6 653 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 ASPSCR1Q9BZE9 553 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 LRRC4CQ9HCJ2 640 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 KLHL42Q9P2K6 505 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 CORO1CQ9ULV4 474 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 PCDHB11Q9Y5F2 797 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 FREM2Q5SZK8 3169 aa15.34■□□□□ 0.05
RABGGTA-206ENST00000558649 KLK10O43240 276 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 PSIP1O75475 530 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 GSTA2P09210 222 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 MPC1LP0DKB6 136 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 ENO3P13929 434 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FOLR1P15328 257 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 ST6GAL1P15907 406 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 CD9P21926 228 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FDXRP22570 491 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 MAP4P27816 1152 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 ITPKBP27987 946 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 PEBP1P30086 187 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 STX2P32856 288 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 SKIV2L2P42285 1042 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 RGS4P49798 205 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 TSTA3Q13630 321 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 EFTUD2Q15029 972 aaKnown RBP eCLIP15.33■□□□□ 0.045e-7■■■■■ 30.2
RABGGTA-206ENST00000558649 GPR19Q15760 415 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 NEK10Q6ZWH5 1172 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 KMT5CQ86Y97 462 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 RASGRP3Q8IV61 690 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FAM20CQ8IXL6 584 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 MYO1HQ8N1T3 1032 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FBF1Q8TES7 1133 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 VPS39Q96JC1 886 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 SLC41A2Q96JW4 573 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 OR2A14Q96R47 310 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FMO2Q99518 471 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FBXO8Q9NRD0 319 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 C1GALT1Q9NS00 363 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
RABGGTA-206ENST00000558649 FAM159BA6NKW6 160 aa15.32■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF460Q14592 562 aa15.32■□□□□ 0.04
RABGGTA-206ENST00000558649 TGIF1Q15583 401 aa15.32■□□□□ 0.04
RABGGTA-206ENST00000558649 KBTBD12Q3ZCT8 623 aa15.32■□□□□ 0.04
RABGGTA-206ENST00000558649 TMTC4Q5T4D3 741 aa15.32■□□□□ 0.04
RABGGTA-206ENST00000558649 C19orf48Q6RUI8 117 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms