RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NDST2P52849 883 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 LIMK1P53667 647 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 SNRPD1P62314 119 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 DYNLT1P63172 113 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 MC2RQ01718 297 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 ZBTB16Q05516 673 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 IL10RBQ08334 325 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 RALGDSQ12967 914 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 ZBTB17Q13105 803 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PDE1CQ14123 709 aaPredicted RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 FZD2Q14332 565 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 KRT81Q14533 505 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PTPRCAPQ14761 206 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PAFAH1B3Q15102 231 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 UGP2Q16851 508 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 WSCD2Q2TBF2 565 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 TMEM52BQ4KMG9 183 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 INO80DQ53TQ3 878 aaPredicted RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 ZNF805Q5CZA5 627 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 WDR45BQ5MNZ6 344 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 SYCP2LQ5T4T6 812 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 RNF220Q5VTB9 566 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 FAM46CQ5VWP2 391 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 KAZNQ674X7 775 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 DENND2CQ68D51 928 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 ZNF783Q6ZMS7 281 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 HSD11B1LQ7Z5J1 315 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PRPF39Q86UA1 669 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 HORMAD1Q86X24 394 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 VRK3Q8IV63 474 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 RBFAQ8N0V3 343 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 EID2Q8N6I1 236 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 SPATA22Q8NHS9 363 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 CCL4L1Q8NHW4 92 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PROKR1Q8TCW9 393 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PDCD6IPQ8WUM4 868 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 NAT14Q8WUY8 206 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 PIH1D2Q8WWB5 315 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 CTNNBL1Q8WYA6 563 aaPredicted RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 TSACCQ96A04 125 aaPredicted RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 ISG20Q96AZ6 181 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 FAF2Q96CS3 445 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 FEM1CQ96JP0 617 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 TRIB1Q96RU8 372 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 WDR24Q96S15 920 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 SEMA3CQ99985 751 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 CALN1Q9BXU9 219 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 GALNT9Q9HCQ5 603 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 MRPL40Q9NQ50 206 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 TM7SF3Q9NS93 570 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 RBM22Q9NW64 420 aaKnown RBP eCLIP4.23□□□□□ -1.73
SPG11-211ENST00000558561 ZNHIT6Q9NWK9 470 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 PIH1D1Q9NWS0 290 aaKnown RBP4.23□□□□□ -1.73
SPG11-211ENST00000558561 CD84Q9UIB8 345 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 KCNE5Q9UJ90 142 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 KLK13Q9UKR3 277 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 FZD4Q9ULV1 537 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 CHKBQ9Y259 395 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 HEY1Q9Y5J3 304 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 SCINQ9Y6U3 715 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 CACNA1AO00555 2505 aa4.23□□□□□ -1.73
SPG11-211ENST00000558561 TPRP12270 2363 aaKnown RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 LY6G6EA0A0G2JKS1 128 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 GRID2IPA4D2P6 1211 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 TMEM202A6NGA9 273 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 ARHGAP42A6NI28 874 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 LRRC72A6NJI9 287 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 EIF3CLB5ME19 914 aaKnown RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 M0QYG6 137 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 ALOX15BO15296 676 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 PHGDHO43175 533 aaKnown RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 BUD23O43709 281 aaKnown RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 CST8O60676 142 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 UNC5CO95185 931 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 CLDN7O95471 211 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 ABHD16AO95870 558 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 HRGP04196 525 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 RHCEP18577 417 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 CHRM3P20309 590 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 MAKP20794 623 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 FDXRP22570 491 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 LHCGRP22888 699 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 DGKAP23743 735 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 HNF1BP35680 557 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 GARSP41250 739 aaKnown RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 ARHGAP25P42331 645 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 CDKN2BP42772 138 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 NEK3P51956 506 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 AIF1P55008 147 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 NXPH1P58417 271 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 POU6F2P78424 691 aaPredicted RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 SIM1P81133 766 aaPredicted RBP4.22□□□□□ -1.73
SPG11-211ENST00000558561 RHDQ02161 417 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 PIGFQ07326 219 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 NSUN2Q08J23 767 aaKnown RBP eCLIP4.22□□□□□ -1.73
SPG11-211ENST00000558561 GALNT2Q10471 571 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 WASHC5Q12768 1159 aa4.22□□□□□ -1.73
SPG11-211ENST00000558561 BOP1Q14137 746 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms