RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ISM1B1AKI9 464 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 KDM1AO60341 852 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 UNC5CO95185 931 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 KRT1P04264 644 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 CHRM5P08912 532 aaPredicted RBP17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 PDHA2P29803 388 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 TMPRSS15P98073 1019 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 NKG7Q16617 165 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 FIGNQ5HY92 759 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 ZNF324BQ6AW86 544 aaPredicted RBP17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 SHISA6Q6ZSJ9 500 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 DNAJC22Q8N4W6 341 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 CCDC110Q8TBZ0 833 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 TRIM56Q9BRZ2 755 aaKnown RBP17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 SLC22A11Q9NSA0 550 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 EURLQ9NYK6 297 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 SEC14L3Q9UDX4 400 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 ASF1AQ9Y294 204 aa17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 TDRKHQ9Y2W6 561 aaKnown RBP17.12■□□□□ 0.33
TSPAN3-204ENST00000558394 AKAP9Q99996 3911 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 C5orf60A6NFR6 353 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 KLHL18O94889 574 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 CRYABP02511 175 aaKnown RBP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 CTSBP07858 339 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 ESRRAP11474 423 aaPredicted RBP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 CA7P43166 264 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 NR2C2P49116 596 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 FANCCQ00597 558 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 OR11G2Q8NGC1 345 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 OXNAD1Q96HP4 312 aaPredicted RBP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 VAT1Q99536 393 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 SPSB2Q99619 263 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 OR6C2Q9NZP2 312 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 POLG2Q9UHN1 485 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 RSPH14Q9UHP6 348 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 PCNX1Q96RV3 2341 aa17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 SNRNP200O75643 2136 aaKnown RBP17.11■□□□□ 0.33
TSPAN3-204ENST00000558394 A0A1B0GTH6 734 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 MAP2K7O14733 419 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 KCNN4O15554 427 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 USP1O94782 785 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 CRTAMO95727 393 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 HPP00738 406 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SERPINC1P01008 464 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 MYBL2P10244 700 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 PBX1P40424 430 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SMSP52788 366 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 WASHC5Q12768 1159 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 TFDP2Q14188 446 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SPNS3Q6ZMD2 512 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 KBTBD2Q8IY47 623 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 OR5AR1Q8NGP9 310 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 CHTF18Q8WVB6 975 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 TAAR6Q96RI8 345 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 CRB3Q9BUF7 120 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SLC26A1Q9H2B4 701 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 ZNF160Q9HCG1 818 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 SPHK1Q9NYA1 384 aa17.1■□□□□ 0.33
TSPAN3-204ENST00000558394 DSCR3O14972 297 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 AGTP01019 485 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 GSTM1P09488 218 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 ACPPP15309 386 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 CARSP49589 748 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 TNFSF10P50591 281 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 GEMP55040 296 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 GSTM4Q03013 218 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 GRM7Q14831 915 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 MCATQ8IVS2 390 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 TBC1D21Q8IYX1 336 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 ZNF567Q8N184 647 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 TTC29Q8NA56 475 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 SUN3Q8TAQ9 357 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 FICDQ9BVA6 458 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 CUTCQ9NTM9 273 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 ZDHHC3Q9NYG2 299 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 PLA2G3Q9NZ20 509 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 IL1RAPL1Q9NZN1 696 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 SAE1Q9UBE0 346 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 MRPS2Q9Y399 296 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-204ENST00000558394 AGAP14A8MT82 685 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 ANXA9O76027 345 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 RASAL1O95294 804 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 ONECUT2O95948 504 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 TNNT1P13805 278 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 XIAPP98170 497 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 OCA2Q04671 838 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 Q0VFX4 171 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 KIR2DS3Q14952 304 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
TSPAN3-204ENST00000558394 YOD1Q5VVQ6 348 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms