RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 ACSBG2Q5FVE4 666 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 STEAP4Q687X5 459 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 CNSTQ6PJW8 725 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 SPESP1Q6UW49 350 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 LMNTD2Q8IXW0 634 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
ALPK3-202ENST00000558077 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 DENND1AQ8TEH3 1009 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 IL17FQ96PD4 163 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 FCRL4Q96PJ5 515 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 UBL7Q96S82 380 aaPredicted RBP13.12□□□□□ -0.31
ALPK3-202ENST00000558077 KLHL25Q9H0H3 589 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 FAM60AQ9NP50 221 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 OR6C2Q9NZP2 312 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 IL17BQ9UHF5 180 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 RARRES3Q9UL19 164 aa13.12□□□□□ -0.31
ALPK3-202ENST00000558077 ANKRD12Q6UB98 2062 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 HEATR5BQ9P2D3 2071 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 PIPSLA2A3N6 862 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 E7ESA3 106 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 H3BMH7 237 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 H3BMM5 538 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 MSL3P1P0C860 447 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ERVK-10P10266 1014 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ATP5DP30049 168 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CASQ1P31415 396 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ELK3P41970 407 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 STAT5AP42229 794 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ATP1A2P50993 1020 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 RAB28P51157 221 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TUBB4BP68371 445 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CYP4F2P78329 520 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TMED2Q15363 201 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 LINC00303Q3SY05 128 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 HP1BP3Q5SSJ5 553 aaPredicted RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 PRAMEF17Q5VTA0 474 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TRMT10BQ6PF06 316 aaKnown RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CYHR1Q6ZMK1 362 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CDHR3Q6ZTQ4 885 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 BPHLQ86WA6 291 aaPredicted RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 DCUN1D3Q8IWE4 304 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CNTN4Q8IWV2 1026 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 FAM20CQ8IXL6 584 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ZBTB2Q8N680 514 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 IL22RA1Q8N6P7 574 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 SLC38A9Q8NBW4 561 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 GALNT6Q8NCL4 622 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 C2CD4AQ8NCU7 369 aaPredicted RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 OR1L3Q8NH93 324 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 ULBP3Q9BZM4 244 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CHRNA10Q9GZZ6 450 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 PDE7BQ9NP56 450 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 IARS2Q9NSE4 1012 aaKnown RBP13.11□□□□□ -0.31
ALPK3-202ENST00000558077 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
ALPK3-202ENST00000558077 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 KALRNO60229 2985 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 SMAPO00193 183 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 RASGRF2O14827 1237 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 RAD51CO43502 376 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 CTSBP07858 339 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 CHRM3P20309 590 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 CD9P21926 228 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 BDKRB1P46663 353 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 RHDQ02161 417 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 C2orf54Q08AI8 447 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.1□□□□□ -0.31
ALPK3-202ENST00000558077 TEDDM1Q5T9Z0 273 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 C6orf15Q6UXA7 325 aaPredicted RBP13.1□□□□□ -0.31
ALPK3-202ENST00000558077 C2orf73Q8N5S3 287 aaPredicted RBP13.1□□□□□ -0.31
ALPK3-202ENST00000558077 ESX1Q8N693 406 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 OR2L8Q8NGY9 312 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 SNF8Q96H20 258 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 SLC45A3Q96JT2 553 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
ALPK3-202ENST00000558077 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 KLHL42Q9P2K6 505 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 VPS9D1Q9Y2B5 631 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 CCDC88CQ9P219 2028 aa13.1□□□□□ -0.31
ALPK3-202ENST00000558077 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
ALPK3-202ENST00000558077 A0A1W2PPV9 198 aa13.09□□□□□ -0.31
ALPK3-202ENST00000558077 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms