RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZFR2Q9UPR6 939 aaKnown RBP7.21□□□□□ -1.26
SPG11-204ENST00000557866 PDE10AQ9Y233 779 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 DNAJC15Q9Y5T4 150 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 PIAS3Q9Y6X2 628 aa7.21□□□□□ -1.26
SPG11-204ENST00000557866 EYSQ5T1H1 3165 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 KIAA1549LQ6ZVL6 1849 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 ZNF106Q9H2Y7 1883 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 KRT87PA6NCN2 255 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TRPC5OSA6NMA1 111 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 PIP5K1BO14986 540 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 KLF8O95600 359 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 ESRRBO95718 433 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 MLYCDO95822 493 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 FTH1P02794 183 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 C8GP07360 202 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 ESRRAP11474 423 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 ZNF8P17098 575 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 VCLP18206 1134 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 EPORP19235 508 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 EPHA1P21709 976 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 PIK3R1P27986 724 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 CPOXP36551 454 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 GDF5P43026 501 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 PREPP48147 710 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 HSPA7P48741 367 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 ELF3P78545 371 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 ABRQ12979 859 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TRAF3Q13114 568 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 BOP1Q14137 746 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 TBCCQ15814 346 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 RBBP7Q16576 425 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TCHHL1Q5QJ38 904 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 ZNF776Q68DI1 518 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 NXNQ6DKJ4 435 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 RAET1GQ6H3X3 334 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 SULT1C3Q6IMI6 304 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 PNCKQ6P2M8 343 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 ADAMTSL4Q6UY14 1074 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 NEK10Q6ZWH5 1172 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 FRA10AC1Q70Z53 315 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 UBE2R2Q712K3 238 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 LONP2Q86WA8 852 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 RALGPS2Q86X27 583 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 ZNF547Q8IVP9 402 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TEX9Q8N6V9 391 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 DCBLD1Q8N8Z6 715 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 OR56A4Q8NGH8 313 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 HMGCLL1Q8TB92 370 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TWIST2Q8WVJ9 160 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 ELMO1Q92556 727 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 C19orf60Q96EN9 201 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 LENG8Q96PV6 779 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 BTBD10Q9BSF8 475 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 CCM2Q9BSQ5 444 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 CADM1Q9BY67 442 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 OR2AG1Q9H205 316 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 EPHX3Q9H6B9 360 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 C8orf33Q9H7E9 229 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 UBE2ZQ9H832 354 aaPredicted RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 NOL11Q9H8H0 719 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 PARVBQ9HBI1 364 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TRIM39Q9HCM9 518 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 MBNL1Q9NR56 388 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 KLC4Q9NSK0 619 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 GIMAP2Q9UG22 337 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 BTRCQ9Y297 605 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TMEM98Q9Y2Y6 226 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 TIMM22Q9Y584 194 aa7.2□□□□□ -1.26
SPG11-204ENST00000557866 COPG1Q9Y678 874 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 TCF20Q9UGU0 1960 aaKnown RBP7.2□□□□□ -1.26
SPG11-204ENST00000557866 DENND4AQ7Z401 1863 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 ATP6AP2A0A1C7CYW4 349 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 A6NHS1 94 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 A8MUI8 341 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 ARHGEF33A8MVX0 844 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 MEI4A8MW99 385 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 B2RBV5 119 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 TM4SF5O14894 197 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 KPNA5O15131 536 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 SLC16A5O15375 505 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 GSC2O15499 205 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 PRAMEF4O60810 478 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 HNRNPCL1O60812 293 aaKnown RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 RNASEH1O60930 286 aaKnown RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 ATG13O75143 517 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 ATP6AP2O75787 350 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 RNASEH2AO75792 299 aaKnown RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 POP7O75817 140 aaKnown RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 TM7SF2O76062 418 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 OR4F21O95013 312 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 PCDH8O95206 1070 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 MATN4O95460 622 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 S100BP04271 92 aaPredicted RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 PCCBP05166 539 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 ALDOCP09972 364 aaKnown RBP7.19□□□□□ -1.26
SPG11-204ENST00000557866 UROSP10746 265 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 COX4I1P13073 169 aa7.19□□□□□ -1.26
SPG11-204ENST00000557866 HOXB2P14652 356 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms