RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 B3GNT6Q6ZMB0 384 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 RHOUQ7L0Q8 258 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 AMZ2Q86W34 360 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 MEX3DQ86XN8 651 aaKnown RBP3.65□□□□□ -1.83
TDP1-217ENST00000557782 NRROSQ86YC3 692 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 ZNF573Q86YE8 665 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 C1orf87Q8N0U7 546 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 SLC5A8Q8N695 610 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 BANPQ8N9N5 519 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 PNLDC1Q8NA58 520 aaKnown RBP3.65□□□□□ -1.83
TDP1-217ENST00000557782 OR56B1Q8NGI3 324 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 TMEM163Q8TC26 289 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 SLC26A7Q8TE54 656 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 TRIB2Q92519 343 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 PROX1Q92786 737 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 SLCO4A1Q96BD0 722 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 PDLIM2Q96JY6 352 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 UROC1Q96N76 676 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 ASCL2Q99929 193 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 KXD1Q9BQD3 176 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 HAUS8Q9BT25 410 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 PRRG4Q9BZD6 226 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 FAM234AQ9H0X4 552 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 KCNN2Q9H2S1 579 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 DNAJC4Q9NNZ3 241 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 IL17RBQ9NRM6 502 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 FARSBQ9NSD9 589 aaKnown RBP3.65□□□□□ -1.83
TDP1-217ENST00000557782 TMEM51Q9NW97 253 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 FBXL2Q9UKC9 423 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 CDC14AQ9UNH5 594 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 KCNJ14Q9UNX9 436 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 TSC22D4Q9Y3Q8 395 aa3.65□□□□□ -1.83
TDP1-217ENST00000557782 HBS1LQ9Y450 684 aaKnown RBP3.65□□□□□ -1.83
TDP1-217ENST00000557782 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.65□□□□□ -1.83
TDP1-217ENST00000557782 SRPRBQ9Y5M8 271 aaKnown RBP3.65□□□□□ -1.83
TDP1-217ENST00000557782 TAF1P21675 1872 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 KDRP35968 1356 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 PRSS51A0A1B0GVH4 220 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 TARM1B6A8C7 271 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ANKRD28O15084 1053 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 OR10H2O60403 315 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 PRAF2O60831 178 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 RPS6KA5O75582 802 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 DDNO94850 711 aaPredicted RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 PRAMEF12O95522 483 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 GAS8O95995 478 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 GSRP00390 522 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 IGHV2-70P01814 119 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 TOP1P11387 765 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 HNRNPA2B1P22626 353 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 ITGA3P26006 1051 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 MARCKSP29966 332 aaPredicted RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 HNRNPH1P31943 449 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 MPLP40238 635 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 SLC6A12P48065 614 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 COMPP49747 757 aaPredicted RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 MMP15P51511 669 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 NUDT6P53370 316 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 CD81P60033 236 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 TGFB2P61812 414 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 IRX4P78413 519 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 RUNX1T1Q06455 604 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 GPM6BQ13491 265 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 STIM1Q13586 685 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ZKSCAN8Q15776 578 aaPredicted RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 NPTX1Q15818 432 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 PTGISQ16647 500 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 SLC9C1Q4G0N8 1177 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 MIDNQ504T8 468 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 FAM46CQ5VWP2 391 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 C18orf63Q68DL7 685 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ZNF585AQ6P3V2 769 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ZNF813Q6ZN06 617 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ZC3HC1Q86WB0 502 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 CHSY1Q86X52 802 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 C1orf52Q8N6N3 182 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 PCDH20Q8N6Y1 951 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 L3MBTL4Q8NA19 623 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 PPFIBP2Q8ND30 876 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 GPT2Q8TD30 523 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ELP5Q8TE02 316 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 SSMEM1Q8WWF3 244 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 SELENOMQ8WWX9 145 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 LINC00476Q8WZB0 136 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 MAP4K1Q92918 833 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 EME1Q96AY2 570 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 WWC2-AS2Q96NR7 200 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 SPAG8Q99932 426 aaPredicted RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 MMTAG2Q9BU76 263 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 ZNF416Q9BWM5 594 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 ACPTQ9BZG2 426 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 KCNMB3Q9NPA1 279 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 NMRK1Q9NWW6 199 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 OSER1Q9NX31 292 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 CLIP2Q9UDT6 1046 aa3.64□□□□□ -1.83
TDP1-217ENST00000557782 AGO2Q9UKV8 859 aaKnown RBP3.64□□□□□ -1.83
TDP1-217ENST00000557782 FAM230AA0A1W2PPH8 454 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 TMEM110-MUSTN1A8MSY1 372 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SOCS6O14544 535 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 DVL1O14640 695 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms