RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 FAM71DQ8N9W8 422 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 CLEC1AQ8NC01 280 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 PTERQ96BW5 349 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 PIH1D1Q9NWS0 290 aaKnown RBP15.37■□□□□ 0.05
SCFD1-224ENST00000557713 P4HTMQ9NXG6 502 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 TDRKHQ9Y2W6 561 aaKnown RBP15.37■□□□□ 0.05
SCFD1-224ENST00000557713 SPTBN1Q01082 2364 aaKnown RBP15.37■□□□□ 0.05
SCFD1-224ENST00000557713 ESPL1Q14674 2120 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 A1L4Q6 167 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 OR51F1A6NGY5 319 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 BTNL10A8MVZ5 291 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 MASP2O00187 686 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 ZSCAN9O15535 394 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 PSMD3O43242 534 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 KLHL41O60662 606 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 UMODP07911 640 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 FOXN2P32314 431 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 FOXL2P58012 376 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 PLOD1Q02809 727 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 KIR2DS3Q14952 304 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 NR6A1Q15406 480 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 NKAIN1Q4KMZ8 207 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 TTC13Q8NBP0 860 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 INPP5DQ92835 1189 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 BARD1Q99728 777 aaKnown RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 SLC22A11Q9NSA0 550 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 NDOR1Q9UHB4 597 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 ERRFI1Q9UJM3 462 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 PLAGL1Q9UM63 463 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 SRPK3Q9UPE1 567 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 PLCL2Q9UPR0 1127 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 REXO2Q9Y3B8 237 aaKnown RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 RP1L1Q8IWN7 2480 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-224ENST00000557713 FER1L5A0AVI2 2057 aa15.36■□□□□ 0.05
SCFD1-224ENST00000557713 SEC16AO15027 2179 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 CCDC162PA2VCL2 907 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 SOWAHDA6NJG2 315 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 ISM1B1AKI9 464 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 CLDN1O95832 211 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 ALPPP05187 535 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 OR56A5P0C7T3 313 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 GDF10P55107 478 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 NAP1L1P55209 391 aaKnown RBP15.35■□□□□ 0.05
SCFD1-224ENST00000557713 KLF1Q13351 362 aaPredicted RBP15.35■□□□□ 0.05
SCFD1-224ENST00000557713 SLC9A5Q14940 896 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 LYPLAL1Q5VWZ2 237 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 Q6ZS92 163 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 RANBP9Q96S59 729 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 ZBTB20Q9HC78 741 aaPredicted RBP15.35■□□□□ 0.05
SCFD1-224ENST00000557713 ATP13A2Q9NQ11 1180 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 TXLNGQ9NUQ3 528 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 EURLQ9NYK6 297 aa15.35■□□□□ 0.05
SCFD1-224ENST00000557713 PIKFYVEQ9Y2I7 2098 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 GRID2IPA4D2P6 1211 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 OR1I1O60431 355 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 IPO13O94829 963 aaKnown RBP15.34■□□□□ 0.05
SCFD1-224ENST00000557713 ONECUT2O95948 504 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 LDLRP01130 860 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 ITGAXP20702 1163 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 P3H1Q32P28 736 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 SYTL3Q4VX76 610 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 CCDC38Q502W7 563 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 MAMDC2Q7Z304 686 aaPredicted RBP15.34■□□□□ 0.05
SCFD1-224ENST00000557713 FAM20CQ8IXL6 584 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 OR13J1Q8NGT2 312 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 NACC2Q96BF6 587 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 PANX2Q96RD6 677 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 NDC1Q9BTX1 674 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 MENTQ9BUN1 341 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 R3HDM2Q9Y2K5 976 aaKnown RBP15.34■□□□□ 0.05
SCFD1-224ENST00000557713 KLHL20Q9Y2M5 609 aa15.34■□□□□ 0.05
SCFD1-224ENST00000557713 COPG1Q9Y678 874 aaKnown RBP15.34■□□□□ 0.05
SCFD1-224ENST00000557713 CCDC88CQ9P219 2028 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 AGPSO00116 658 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 KDM1AO60341 852 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 ALAS2P22557 587 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 COL8A1P27658 744 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 PKLRP30613 574 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 CCR7P32248 378 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 RAB28P51157 221 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 GRB7Q14451 532 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 DNAJC21Q5F1R6 531 aaKnown RBP15.33■□□□□ 0.04
SCFD1-224ENST00000557713 LINC00523Q86TU6 105 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 CUZD1Q86UP6 607 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 MCATQ8IVS2 390 aaKnown RBP15.33■□□□□ 0.04
SCFD1-224ENST00000557713 SLC22A15Q8IZD6 547 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 ZADH2Q8N4Q0 377 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 TAB3Q8N5C8 712 aaPredicted RBP15.33■□□□□ 0.04
SCFD1-224ENST00000557713 LINC01555Q8NAE3 123 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 OR52K1Q8NGK4 314 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 TM9SF4Q92544 642 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms