RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OR13F1Q8NGS4 319 aa17.31■□□□□ 0.36
XRCC3-218ENST00000557439 FNDC8Q8TC99 324 aa17.31■□□□□ 0.36
XRCC3-218ENST00000557439 MIPOL1Q8TD10 442 aa17.31■□□□□ 0.36
XRCC3-218ENST00000557439 UGT2B28Q9BY64 529 aa17.31■□□□□ 0.36
XRCC3-218ENST00000557439 DNMT3BQ9UBC3 853 aaKnown RBP17.31■□□□□ 0.36
XRCC3-218ENST00000557439 A0A1W2PQ67 120 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 XYLBO75191 536 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 SH3BGRLO75368 114 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 E2F6O75461 281 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CREG1O75629 220 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 INHAP05111 366 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 FSHRP23945 695 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CCR7P32248 378 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PSMD7P51665 324 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 MLLT10P55197 1068 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 IL1RL1Q01638 556 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CD47Q08722 323 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 BFSP2Q13515 415 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 ATP13A5Q4VNC0 1218 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 ANKRD26P1Q6NSI1 321 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 C8orf59Q8N0T1 100 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 NXPE1Q8N323 547 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 HJURPQ8NCD3 748 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 DOK1Q99704 481 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 OSBPL10Q9BXB5 764 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 EBPLQ9BY08 206 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 GORASP2Q9H8Y8 452 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 C8orf4Q9NR00 106 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PPT2Q9UMR5 302 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 VPS4AQ9UN37 437 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CYP4B1P13584 511 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 ITPKAP23677 461 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 RPIAP49247 311 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 ATN1P54259 1190 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 AP1S1P61966 158 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PPP2R2BQ00005 443 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 VAC14Q08AM6 782 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 LMAN2Q12907 356 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 BBS7Q8IWZ6 715 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 MICU2Q8IYU8 434 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PARP8Q8N3A8 854 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 DCAF4L2Q8NA75 395 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CHDHQ8NE62 594 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 SELENOMQ8WWX9 145 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 OVCA2Q8WZ82 227 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 ACDQ96AP0 544 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 SDCCAG3Q96C92 435 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 MYOCQ99972 504 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 KAT8Q9H7Z6 458 aaKnown RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PLGRKTQ9HBL7 147 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 SERHLQ9NQF3 203 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 C1orf109Q9NX04 203 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 DNAJB9Q9UBS3 223 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 INTS6Q9UL03 887 aaKnown RBP17.3■□□□□ 0.36
XRCC3-218ENST00000557439 CDH7Q9ULB5 785 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 PDE10AQ9Y233 779 aa17.3■□□□□ 0.36
XRCC3-218ENST00000557439 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 SLC28A1O00337 649 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 PRAMEF4O60810 478 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 ABLIM3O94929 683 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 PARNO95453 639 aaKnown RBP17.29■□□□□ 0.36
XRCC3-218ENST00000557439 NFATC3Q12968 1075 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 PRAMEF9Q5VWM5 478 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 CRTC1Q6UUV9 634 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 TRIM46Q7Z4K8 759 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 APIPQ96GX9 242 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 CCDC115Q96NT0 180 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 MRPL9Q9BYD2 267 aaKnown RBP17.29■□□□□ 0.36
XRCC3-218ENST00000557439 PARVBQ9HBI1 364 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 PAK1IP1Q9NWT1 392 aaPredicted RBP17.29■□□□□ 0.36
XRCC3-218ENST00000557439 DGKBQ9Y6T7 804 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 XPNPEP2O43895 674 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 CPNE6O95741 557 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 SPAM1P38567 509 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 RPS14P62263 151 aaKnown RBP17.29■□□□□ 0.36
XRCC3-218ENST00000557439 DPY19L1Q2PZI1 675 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 BROXQ5VW32 411 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 SPARTQ8N0X7 666 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 VOPP1Q96AW1 172 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 FAM120BQ96EK7 910 aaKnown RBP17.29■□□□□ 0.36
XRCC3-218ENST00000557439 ATG10Q9H0Y0 220 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 RETREG1Q9H6L5 497 aa17.29■□□□□ 0.36
XRCC3-218ENST00000557439 IFRD1O00458 451 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 CLDN9O95484 217 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 EBLN1P0CF75 366 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 LHCGRP22888 699 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 DCTP40126 519 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 OR4F3Q6IEY1 312 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 SERPINA13PQ6UXR4 307 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 APOLD1Q96LR9 279 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms