RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 C3AR1Q16581 482 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 IRAK1BP1Q5VVH5 260 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 ATG9BQ674R7 924 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 MTFR2Q6P444 385 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 MTFMTQ96DP5 389 aaKnown RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 MAGEB10Q96LZ2 347 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 FCRL5Q96RD9 977 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 TREX2Q9BQ50 279 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 FAM96AQ9H5X1 160 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 SOX17Q9H6I2 414 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 MRM3Q9HC36 420 aaKnown RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 ENAMQ9NRM1 1142 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 ABI3Q9P2A4 366 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 SAE1Q9UBE0 346 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-221ENST00000557293 CTSFQ9UBX1 484 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 SH3BGRL2Q9UJC5 107 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 KLHL20Q9Y2M5 609 aa12.03□□□□□ -0.48
PSEN1-221ENST00000557293 IGLV3-16A0A075B6K0 115 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 TRAV17A0A0B4J275 112 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 A0A1B0GX78 115 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 APOL1O14791 398 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 MED26O95402 600 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 HPP00738 406 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 AGTP01019 485 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 MCM3P25205 808 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 CDKN1CP49918 316 aaPredicted RBP12.02□□□□□ -0.49
PSEN1-221ENST00000557293 INAQ16352 499 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 RBBP7Q16576 425 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.02□□□□□ -0.49
PSEN1-221ENST00000557293 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
PSEN1-221ENST00000557293 MCATQ8IVS2 390 aaKnown RBP12.02□□□□□ -0.49
PSEN1-221ENST00000557293 OR13C4Q8NGS5 318 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 GORASP1Q9BQQ3 440 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 MCCC2Q9HCC0 563 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 SEMA3GQ9NS98 782 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 SEC14L3Q9UDX4 400 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 ZNF835Q9Y2P0 537 aa12.02□□□□□ -0.49
PSEN1-221ENST00000557293 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.49
PSEN1-221ENST00000557293 A0A1B0GTL3 188 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 IFRD1O00458 451 aaPredicted RBP12.01□□□□□ -0.49
PSEN1-221ENST00000557293 DSCR3O14972 297 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 PPP1R12AO14974 1030 aaPredicted RBP12.01□□□□□ -0.49
PSEN1-221ENST00000557293 PRR35P0CG20 571 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 OR1D4P47884 311 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 ARSFP54793 590 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 ARG2P78540 354 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 TLE4Q04727 773 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 RPA4Q13156 261 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 OLIG2Q13516 323 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 TAF1AQ15573 450 aaPredicted RBP12.01□□□□□ -0.49
PSEN1-221ENST00000557293 RANBP10Q6VN20 620 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 HOOK3Q86VS8 718 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 VSIG1Q86XK7 387 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 MMP21Q8N119 569 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 ZNF567Q8N184 647 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
PSEN1-221ENST00000557293 IPMKQ8NFU5 416 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 DLG3Q92796 817 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 C8orf44Q96CB5 159 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 DCUN1D1Q96GG9 259 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 ZNF285Q96NJ3 590 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 TMUB1Q9BVT8 246 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 NEU2Q9Y3R4 380 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 CACNA1CQ13936 2221 aa12.01□□□□□ -0.49
PSEN1-221ENST00000557293 TRBV5-4A0A0C4DH59 114 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 BHMG1C9JSJ3 638 aaPredicted RBP12□□□□□ -0.49
PSEN1-221ENST00000557293 CLDN14O95500 239 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 F10P00742 488 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 PRSS56P0CW18 603 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 PIM1P11309 404 aaPredicted RBP12□□□□□ -0.49
PSEN1-221ENST00000557293 MAGP20916 626 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 SHMT2P34897 504 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 ADRA1AP35348 466 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 KLC1Q07866 573 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 MPP3Q13368 585 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 NCCRP1Q6ZVX7 275 aaPredicted RBP12□□□□□ -0.49
PSEN1-221ENST00000557293 PID1Q7Z2X4 250 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 LAPTM4BQ86VI4 370 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 KBTBD2Q8IY47 623 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 CLDN19Q8N6F1 224 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 BRIX1Q8TDN6 353 aaKnown RBP12□□□□□ -0.49
PSEN1-221ENST00000557293 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
PSEN1-221ENST00000557293 COPS8Q99627 209 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 TMEM121Q9BTD3 319 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 PACSIN1Q9BY11 444 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 CUTCQ9NTM9 273 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 OR6C2Q9NZP2 312 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 PTGFRNQ9P2B2 879 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 CTTNBP2NLQ9P2B4 639 aa12□□□□□ -0.49
PSEN1-221ENST00000557293 TINAGQ9UJW2 476 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms