RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SHMT2P34897 504 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ARHGAP25P42331 645 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 CDKN1CP49918 316 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ZNF140P52738 457 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 OTUD4Q01804 1114 aaKnown RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ART3Q13508 389 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 TFDP2Q14188 446 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 NKG7Q16617 165 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ZNF449Q6P9G9 518 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 RANBP10Q6VN20 620 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 LINC00696Q6ZRV3 163 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 TTLL10Q6ZVT0 673 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 GDF7Q7Z4P5 450 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 SNX20Q7Z614 316 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 DNAJC22Q8N4W6 341 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 CLDN19Q8N6F1 224 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 BCORP1Q8N888 145 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 HEXDCQ8WVB3 486 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ITLN2Q8WWU7 325 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 P3H4Q92791 437 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 RELTQ969Z4 430 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 HAUS1Q96CS2 278 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 THOC3Q96J01 351 aaKnown RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 SPSB2Q99619 263 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 LHPPQ9H008 270 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 EPS8L2Q9H6S3 715 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 VPS37BQ9H9H4 285 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 DDX56Q9NY93 547 aaKnown RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 EURLQ9NYK6 297 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 ASF1AQ9Y294 204 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 KLHL20Q9Y2M5 609 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 MED13LQ71F56 2210 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 IGLV3-16A0A075B6K0 115 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 A0A1B0GX78 115 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ISM1B1AKI9 464 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ANXA9O76027 345 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 KLHL18O94889 574 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 CRTAMO95727 393 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 PRSS56P0CW18 603 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 MC4RP32245 332 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ADRA1AP35348 466 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 GCGRP47871 477 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 GEMP55040 296 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 UBASH3AP57075 661 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 FANCCQ00597 558 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 Q0VFX4 171 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 RPA4Q13156 261 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 MSLNQ13421 630 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 IQCB1Q15051 598 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 TAZQ16635 292 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 FCRL6Q6DN72 434 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ISLR2Q6UXK2 745 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 OVCH1Q7RTY7 1134 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 OR11G2Q8NGC1 345 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 OR1N1Q8NGS0 311 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 FKBP10Q96AY3 582 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 IQCDQ96DY2 449 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 GBP4Q96PP9 640 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 QKIQ96PU8 341 aaKnown RBP eCLIP8.67□□□□□ -1.021e-7■■□□□ 11.5
HNRNPC-227ENST00000556897 TAAR6Q96RI8 345 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 MESP1Q9BRJ9 268 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 GBA3Q9H227 469 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 C10orf88Q9H8K7 445 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 WDR54Q9H977 334 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 MRM3Q9HC36 420 aaKnown RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 OR6C2Q9NZP2 312 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 CTSFQ9UBX1 484 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 ITGB1BP2Q9UKP3 347 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 TRHDEQ9UKU6 1024 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 PLAGL1Q9UM63 463 aa8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 TDRKHQ9Y2W6 561 aaKnown RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 KLF2Q9Y5W3 355 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-227ENST00000556897 AKAP9Q99996 3911 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 TRGV8A0A0C4DH27 118 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 PCDH17O14917 1159 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 SPOPO43791 374 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 MBD3O95983 291 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 ALBP02768 609 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 MAGP20916 626 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 COMTP21964 271 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 MCM3P25205 808 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 ACRV1P26436 265 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 ACADLP28330 430 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 HTR1EP28566 365 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 PEBP1P30086 187 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 PTGER4P35408 488 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 SLC1A1P43005 524 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 TDGF1P3P51864 188 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 ARSFP54793 590 aa8.66□□□□□ -1.02
HNRNPC-227ENST00000556897 ARG2P78540 354 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms