RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 MENTQ9BUN1 341 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 TBC1D10AQ9BXI6 508 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 C12orf65Q9H3J6 166 aaKnown RBP16.91■□□□□ 0.3
TUBB3-211ENST00000556536 STN1Q9H668 368 aaKnown RBP16.91■□□□□ 0.3
TUBB3-211ENST00000556536 UTP6Q9NYH9 597 aaKnown RBP16.91■□□□□ 0.3
TUBB3-211ENST00000556536 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 NOVA2Q9UNW9 492 aaKnown RBP16.91■□□□□ 0.3
TUBB3-211ENST00000556536 ICKQ9UPZ9 632 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 OARD1Q9Y530 152 aa16.91■□□□□ 0.3
TUBB3-211ENST00000556536 EME2A4GXA9 379 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-211ENST00000556536 MYO1CO00159 1063 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 COPEO14579 308 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 CASC3O15234 703 aaKnown RBP16.9■□□□□ 0.3
TUBB3-211ENST00000556536 SPAG7O75391 227 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 SYF2O95926 243 aaKnown RBP16.9■□□□□ 0.3
TUBB3-211ENST00000556536 GSTA1P08263 222 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 CKMT2P17540 419 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 MAP4P27816 1152 aaKnown RBP16.9■□□□□ 0.3
TUBB3-211ENST00000556536 CRHR1P34998 444 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 OR1D5P58170 312 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 TSNAXIP1Q2TAA8 658 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 KLC3Q6P597 504 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 GPSM1Q86YR5 675 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 Q8N9G6 341 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-211ENST00000556536 OR9A1PQ8NGU1 263 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 MAGEC3Q8TD91 643 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 MCOLN3Q8TDD5 553 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 DENND1AQ8TEH3 1009 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 TLCD1Q96CP7 247 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 TSNARE1Q96NA8 513 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 SMC6Q96SB8 1091 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 ATOH8Q96SQ7 321 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 SLC38A3Q99624 504 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 UCK1Q9HA47 277 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 EMCNQ9ULC0 261 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 RNF112Q9ULX5 631 aa16.9■□□□□ 0.3
TUBB3-211ENST00000556536 ASPMQ8IZT6 3477 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 TM4SF5O14894 197 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 KERAO60938 352 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 GLRA3O75311 464 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 GUCA1CO95843 209 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 ENO2P09104 434 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-211ENST00000556536 SBK3P0C264 359 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 PKLRP30613 574 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 DUSP3P51452 185 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-211ENST00000556536 NR1D2Q14995 579 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 PLCL1Q15111 1095 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 AGBL2Q5U5Z8 902 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 FRA10AC1Q70Z53 315 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 LCA5Q86VQ0 697 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 TMEM151AQ8N4L1 468 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 DEFB124Q8NES8 71 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 RHEBL1Q8TAI7 183 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 STAG3L4Q8TBR4 150 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 IFI44Q8TCB0 444 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 LCN9Q8WX39 176 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 EXT2Q93063 718 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 APOPT1Q96IL0 206 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-211ENST00000556536 RDH14Q9HBH5 336 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 MKS1Q9NXB0 559 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 SENP1Q9P0U3 644 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 CPSF2Q9P2I0 782 aaKnown RBP16.89■□□□□ 0.29
TUBB3-211ENST00000556536 XPR1Q9UBH6 696 aa16.89■□□□□ 0.29
TUBB3-211ENST00000556536 RALYQ9UKM9 306 aaKnown RBP16.89■□□□□ 0.29
TUBB3-211ENST00000556536 NCF1BA6NI72 391 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 LILRA5A6NI73 299 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 NCF1CA8MVU1 366 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 UBXN8O00124 270 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 TK2O00142 265 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 B4GAT1O43505 415 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 TYROBPO43914 113 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 OPA1O60313 960 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 SLC16A8O95907 504 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 RBP1P09455 135 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 NCF1P14598 390 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 ALDH4A1P30038 563 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 CCT5P48643 541 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 MAGOHP61326 146 aaKnown RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 TGFBIQ15582 683 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 AMIGO1Q86WK6 493 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 C2orf73Q8N5S3 287 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 NAT6Q93015 286 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 CCDC138Q96M89 665 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 CDC6Q99741 560 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 MRPL57Q9BQC6 102 aaKnown RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 CCDC3Q9BQI4 270 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 STMN4Q9H169 189 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms