RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 KCNK1O00180 336 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 DDX3XO00571 662 aaKnown RBP eCLIP5.67□□□□□ -1.52e-15■■■■■ 68.5
PRKCH-220ENST00000556164 SNRNP200O75643 2136 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CBX6O95503 412 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 RAB40ALP0C0E4 278 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 MX2P20592 715 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ELAVL4P26378 380 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 PBLDP30039 288 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ARCN1P48444 511 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 VAV2P52735 878 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 RRADP55042 308 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ITGA1P56199 1179 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 GSDMDP57764 484 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 GPR85P60893 370 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 MYL5Q02045 173 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TNP2Q05952 138 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 KLHL30Q0D2K2 578 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ATP1A4Q13733 1029 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 BLMHQ13867 455 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 DPYSL3Q14195 570 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 PAFAH1B3Q15102 231 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 RPE65Q16518 533 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 PLEKHN1Q494U1 663 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CCDC92Q53HC0 331 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TMEM177Q53S58 311 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 FAM182AQ5T1J6 154 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TMTC4Q5T4D3 741 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CCDC183Q5T5S1 534 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 VWA5B1Q5TIE3 1220 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 LCN10Q6JVE6 187 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ARMC6Q6NXE6 501 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ZNF517Q6ZMY9 492 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 MED25Q71SY5 747 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TBC1D1Q86TI0 1168 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 AMZ2Q86W34 360 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 OOSP2Q86WS3 158 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 RAB43Q86YS6 212 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 DSELQ8IZU8 1212 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 NIPA2Q8N8Q9 360 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 SLC38A9Q8NBW4 561 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CCNYQ8ND76 341 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 OR8K5Q8NH50 307 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CPT1BQ92523 772 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 FATE1Q969F0 183 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ARL8AQ96BM9 186 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ZNF501Q96CX3 271 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 UBXN10Q96LJ8 280 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ZNF830Q96NB3 372 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TTC25Q96NG3 672 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TSGA13Q96PP4 275 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CD180Q99467 661 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TLR10Q9BXR5 811 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 NLNQ9BYT8 704 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 SLC7A5P2Q9GIP4 190 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ILKAPQ9H0C8 392 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 VPS11Q9H270 941 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 FANCEQ9HB96 536 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 BPIFA1Q9NP55 256 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 KCND1Q9NSA2 647 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 IMP3Q9NV31 184 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ASF1BQ9NVP2 202 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 HRASLS2Q9NWW9 162 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 NFKBIL1Q9UBC1 381 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CGGBP1Q9UFW8 167 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 ANAPC7Q9UJX3 599 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 TCFL5Q9UL49 500 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 MYO6Q9UM54 1294 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 B3GNT3Q9Y2A9 372 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CFAP20Q9Y6A4 193 aaKnown RBP5.67□□□□□ -1.5
PRKCH-220ENST00000556164 CENPEQ02224 2701 aa5.67□□□□□ -1.5
PRKCH-220ENST00000556164 MYO7BQ6PIF6 2116 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 A0A087WV62 115 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 ARHGAP10A1A4S6 786 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 OR6C74A6NCV1 312 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 OR5K3A6NET4 321 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 TMEM150CB9EJG8 249 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 C9J4A7 227 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 J3QW42 95 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 LCA5LO95447 670 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 ZBTB11O95625 1053 aaPredicted RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 SNRPB2P08579 225 aaKnown RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 MTHFD1P11586 935 aaKnown RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 SKILP12757 684 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 CYP2A7P20853 494 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 CDH3P22223 829 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 GRK2P25098 689 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 HNRNPH3P31942 346 aaKnown RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 OTX2P32243 289 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 KPNA2P52292 529 aaKnown RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 GBE1Q04446 702 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 TMEM115Q12893 351 aaPredicted RBP5.66□□□□□ -1.5
PRKCH-220ENST00000556164 ABRQ12979 859 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 ZBTB17Q13105 803 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 XRCC4Q13426 336 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 NFE2L1Q14494 772 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 ACAP2Q15057 778 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 TESK1Q15569 626 aa5.66□□□□□ -1.5
PRKCH-220ENST00000556164 HADHQ16836 314 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms