RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 B4DGG1 531 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 YY2O15391 372 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 VIPP01282 170 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 XRCC1P18887 633 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-208ENST00000555905 IMPDH1P20839 514 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 BGNP21810 368 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 GRK2P25098 689 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 HSD17B2P37059 387 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 NAA20P61599 178 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 HERVK_113P63132 956 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 PRKG2Q13237 762 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 SETDB1Q15047 1291 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 TUBB8Q3ZCM7 444 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 ATG16L1Q676U5 607 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 DUS1LQ6P1R4 473 aaKnown RBP10.73□□□□□ -0.69
TMEM260-208ENST00000555905 MBOAT1Q6ZNC8 495 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 CCNYL1Q8N7R7 359 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 CKAP2Q8WWK9 683 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 RHBDF1Q96CC6 855 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 L3HYPDHQ96EM0 354 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 PKP4Q99569 1192 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 HGH1Q9BTY7 390 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 RAB11FIP5Q9BXF6 653 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 ERVK-6Q9BXR3 956 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 STN1Q9H668 368 aaKnown RBP10.73□□□□□ -0.69
TMEM260-208ENST00000555905 GAREM1Q9H706 876 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 CAAP1Q9H8G2 361 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 PTBP2Q9UKA9 531 aaKnown RBP10.73□□□□□ -0.69
TMEM260-208ENST00000555905 GMEB2Q9UKD1 530 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 ADAMTS9Q9P2N4 1935 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 ARHGEF17Q96PE2 2063 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 KNL1Q8NG31 2342 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 TRBV23OR9-2A0A075B6M9 112 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 A0A1B0GTQ1 180 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 SLC16A8O95907 504 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 SERPINE1P05121 402 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 RETP07949 1114 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 FGF3P11487 239 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 EEF1DP29692 281 aaKnown RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 AGTR2P50052 363 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CCT8P50990 548 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ATXN3P54252 364 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 NAGLUP54802 743 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 TCF15Q12870 199 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 STX3Q13277 289 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 BIRC2Q13490 618 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ARHGAP19Q14CB8 494 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 DEFB133Q30KQ1 61 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CCSMST1Q4G0I0 132 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ANKS6Q68DC2 871 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 TTC19Q6DKK2 380 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 METTL2BQ6P1Q9 378 aaKnown RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 AGTRAPQ6RW13 159 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 SLC9B2Q86UD5 537 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 RBM12BQ8IXT5 1001 aaKnown RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 SFRP1Q8N474 314 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 PRSS33Q8NF86 280 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 MAPK15Q8TD08 544 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 PPP4R1Q8TF05 950 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 UBTD2Q8WUN7 234 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ZFPM2Q8WW38 1151 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF75CPQ92670 426 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ATOH1Q92858 354 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CAMK1GQ96NX5 476 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 TMEM237Q96Q45 408 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 GTPBP2Q9BX10 602 aaKnown RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CD244Q9BZW8 370 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 KIR3DX1Q9H7L2 352 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 FSCN3Q9NQT6 498 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 POT1Q9NUX5 634 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 UCKL1Q9NWZ5 548 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 STOX2Q9P2F5 926 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF624Q9P2J8 865 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CPNE7Q9UBL6 633 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 CIDEBQ9UHD4 219 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 ANGPTL3Q9Y5C1 460 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 PCDH15Q96QU1 1955 aa10.72□□□□□ -0.69
TMEM260-208ENST00000555905 TMEM114B3SHH9 223 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 KLF11O14901 512 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 TAPBPO15533 448 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 NPHS1O60500 1241 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 CCNT2O60583 730 aaKnown RBP10.71□□□□□ -0.69
TMEM260-208ENST00000555905 STK16O75716 305 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SUPT7LO94864 414 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SIX3O95343 332 aaPredicted RBP10.71□□□□□ -0.69
TMEM260-208ENST00000555905 ALPPL2P10696 532 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 ENGP17813 658 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 GGT5P36269 586 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SERPINB5P36952 375 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SLC19A1P41440 591 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PIK3CGP48736 1102 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 HSPA7P48741 367 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PNLIPRP1P54315 467 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 GNGT1P63211 74 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 UBE2IP63279 158 aaKnown RBP10.71□□□□□ -0.69
TMEM260-208ENST00000555905 BNIP3Q12983 259 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms