RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 DCUN1D3Q8IWE4 304 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 SLC22A15Q8IZD6 547 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 EFCAB3Q8N7B9 438 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 TRIM58Q8NG06 486 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 DHRS4Q9BTZ2 278 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 AP1M1Q9BXS5 423 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 TRIM55Q9BYV6 548 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 INTS7Q9NVH2 962 aaKnown RBP14.9□□□□□ -0.02
SNX6-205ENST00000555648 SPHK1Q9NYA1 384 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 NDOR1Q9UHB4 597 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 SRPK3Q9UPE1 567 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 MRFAP1Q9Y605 127 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 ATMQ13315 3056 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 CFAP46Q8IYW2 2715 aa14.9□□□□□ -0.02
SNX6-205ENST00000555648 TTLL8A6PVC2 850 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 IQCF5A8MTL0 148 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 K7EM74 188 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 ZSCAN9O15535 394 aaPredicted RBP14.89□□□□□ -0.03
SNX6-205ENST00000555648 TMEM63AO94886 807 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 PTGIRP43119 386 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 FOXK1P85037 733 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 SEMA3AQ14563 771 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 ZNF789Q5FWF6 425 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 C1orf189Q5VU69 101 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 CPZQ66K79 652 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 LCN10Q6JVE6 187 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 FAM198BQ6UWH4 519 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 UNC5DQ6UXZ4 953 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 OTOAQ7RTW8 1153 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 LRRC6Q86X45 466 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 GLIS1Q8NBF1 620 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 PROKR1Q8TCW9 393 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 FOPNLQ96NB1 174 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 NDC1Q9BTX1 674 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 RAB11FIP5Q9BXF6 653 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 FAM60AQ9NP50 221 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 IFT80Q9P2H3 777 aaPredicted RBP14.89□□□□□ -0.03
SNX6-205ENST00000555648 PLCL2Q9UPR0 1127 aa14.89□□□□□ -0.03
SNX6-205ENST00000555648 PCDHGA9Q9Y5G4 932 aaKnown RBP14.89□□□□□ -0.03
SNX6-205ENST00000555648 ZNF106Q9H2Y7 1883 aaKnown RBP14.89□□□□□ -0.03
SNX6-205ENST00000555648 PEX12O00623 359 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 CD9P21926 228 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 PKLRP30613 574 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 OTX2P32243 289 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 CRADDP78560 199 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 DCDP81605 110 aaKnown RBP14.88□□□□□ -0.03
SNX6-205ENST00000555648 CDK16Q00536 496 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 KYNUQ16719 465 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 MRNIPQ6NTE8 343 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 MED25Q71SY5 747 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 KRT222Q8N1A0 295 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 ZNF655Q8N720 491 aaPredicted RBP14.88□□□□□ -0.03
SNX6-205ENST00000555648 TMEM102Q8N9M5 508 aaPredicted RBP14.88□□□□□ -0.03
SNX6-205ENST00000555648 DENND1AQ8TEH3 1009 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 DLG3Q92796 817 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 IP6K3Q96PC2 410 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 CHRNA10Q9GZZ6 450 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 SPRTNQ9H040 489 aaPredicted RBP14.88□□□□□ -0.03
SNX6-205ENST00000555648 ZNF451Q9Y4E5 1061 aa14.88□□□□□ -0.03
SNX6-205ENST00000555648 A6NL46 340 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 ZNF185O15231 689 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 GPC4O75487 556 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 S1PR4O95977 384 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 PAMP19021 973 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 ALAS2P22557 587 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 MGAT1P26572 445 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 AOAHP28039 575 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 FOLR3P41439 243 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 KCNJ1P48048 391 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 TERF1P54274 439 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 EIF3BP55884 814 aaKnown RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 SF1Q15637 639 aaKnown RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 ZIC1Q15915 447 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 RNF187Q5TA31 235 aaPredicted RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 RHBDD2Q6NTF9 364 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 CASC4Q6P4E1 433 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 LRRC8BQ6P9F7 803 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 ZNF662Q6ZS27 426 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 TAX1BP1Q86VP1 789 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 VRK3Q8IV63 474 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 C2orf73Q8N5S3 287 aaPredicted RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 LKAAEAR1Q8TD35 194 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 RAD51AP1Q96B01 352 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 MARCH4Q9P2E8 410 aaPredicted RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 CIDEBQ9UHD4 219 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 TTC7AQ9ULT0 858 aaPredicted RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 PTRH2Q9Y3E5 179 aaKnown RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 PCDHGB7Q9Y5F8 929 aa14.87□□□□□ -0.03
SNX6-205ENST00000555648 TLN1Q9Y490 2541 aaKnown RBP14.87□□□□□ -0.03
SNX6-205ENST00000555648 H3BMM5 538 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 DPM1O60762 260 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 VPS4BO75351 444 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 SLCO2B1O94956 709 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 VAPBO95292 243 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 IGHEP01854 428 aa14.86□□□□□ -0.03
SNX6-205ENST00000555648 TPBGLP0DKB5 382 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms