RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 NTRK1P04629 796 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 BDKRB1P46663 353 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 RAB28P51157 221 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 MPP1Q00013 466 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 ZIC1Q15915 447 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 BBS9Q3SYG4 887 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 CCSMST1Q4G0I0 132 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 TAF1BQ53T94 588 aaPredicted RBP19.82■□□□□ 0.76
VTI1B-205ENST00000555543 HSP90AA5PQ58FG0 334 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 PRAMEF17Q5VTA0 474 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 CDHR3Q6ZTQ4 885 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 GIMAP7Q8NHV1 300 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 GSDMBQ8TAX9 411 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 SKA2Q8WVK7 121 aaPredicted RBP19.82■□□□□ 0.76
VTI1B-205ENST00000555543 KIAA1143Q96AT1 154 aaPredicted RBP19.82■□□□□ 0.76
VTI1B-205ENST00000555543 SLC45A3Q96JT2 553 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 FCRL4Q96PJ5 515 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 SLC30A3Q99726 388 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 EBNA1BP2Q99848 306 aaKnown RBP19.82■□□□□ 0.76
VTI1B-205ENST00000555543 PLAC1Q9HBJ0 212 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 RNF14Q9UBS8 474 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 CROTQ9UKG9 612 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 VPS9D1Q9Y2B5 631 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 MRPS18BQ9Y676 258 aaKnown RBP19.82■□□□□ 0.76
VTI1B-205ENST00000555543 SNRNP200O75643 2136 aaKnown RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 TERTO14746 1132 aaKnown RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 C1QL1O75973 258 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 RPN2P04844 631 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 CHRM3P20309 590 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 MRPS25P82663 173 aaKnown RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 MORF4L2Q15014 288 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 LINC00303Q3SY05 128 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 ACSBG2Q5FVE4 666 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 HIBCHQ6NVY1 386 aaPredicted RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 CNSTQ6PJW8 725 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 KCNMB4Q86W47 210 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 BPHLQ86WA6 291 aaPredicted RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 FAM20CQ8IXL6 584 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 C2orf73Q8N5S3 287 aaPredicted RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 ZBTB2Q8N680 514 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 C19orf47Q8N9M1 422 aaKnown RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 LSM14AQ8ND56 463 aaKnown RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 OR1L3Q8NH93 324 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 EXTL1Q92935 676 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 KRT12Q99456 494 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 TRIM31Q9BZY9 425 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 SEMA4CQ9C0C4 833 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 AKIRIN1Q9H9L7 192 aaPredicted RBP19.81■□□□□ 0.76
VTI1B-205ENST00000555543 FAM60AQ9NP50 221 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 LATS2Q9NRM7 1088 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 FBXO5Q9UKT4 447 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 BOD1L1Q8NFC6 3051 aa19.81■□□□□ 0.76
VTI1B-205ENST00000555543 A0A0J9YY10 115 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 ISM1B1AKI9 464 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 TMEM150CB9EJG8 249 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 HCRTR1O43613 425 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 KDM1AO60341 852 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 SCRG1O75711 98 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 SEC31AO94979 1220 aaKnown RBP19.8■□□□□ 0.76
VTI1B-205ENST00000555543 C1orf105O95561 183 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 MSL3P1P0C860 447 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 CD9P21926 228 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 ATP5DP30049 168 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 CLCN7P51798 805 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 ITGA8P53708 1063 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 LY6DQ14210 128 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 KIR2DS3Q14952 304 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 HP1BP3Q5SSJ5 553 aaPredicted RBP19.8■□□□□ 0.76
VTI1B-205ENST00000555543 TAX1BP1Q86VP1 789 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 TMEM126BQ8IUX1 230 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 LMNTD2Q8IXW0 634 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 SLC38A9Q8NBW4 561 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 OR8K5Q8NH50 307 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 STARD8Q92502 1023 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 WBP1Q96G27 269 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 FAM167BQ9BTA0 163 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 LHX9Q9NQ69 397 aa19.8■□□□□ 0.76
VTI1B-205ENST00000555543 IARS2Q9NSE4 1012 aaKnown RBP19.8■□□□□ 0.76
VTI1B-205ENST00000555543 SPTBP11277 2137 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 ZNF891A8MT65 544 aaPredicted RBP19.79■□□□□ 0.76
VTI1B-205ENST00000555543 E5RI56 91 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 TK2O00142 265 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 RASGRF2O14827 1237 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 NKX2-8O15522 239 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 CPNE3O75131 537 aaKnown RBP19.79■□□□□ 0.76
VTI1B-205ENST00000555543 HAUS5O94927 633 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 MATN4O95460 622 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 DLSTP36957 453 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 ETF1P62495 437 aaKnown RBP19.79■□□□□ 0.76
VTI1B-205ENST00000555543 DEFB110Q30KQ9 67 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 SYT10Q6XYQ8 523 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 OR2L8Q8NGY9 312 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 CALML6Q8TD86 181 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 CT55Q8WUE5 264 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 SNF8Q96H20 258 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 FANCEQ9HB96 536 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 SLC17A6Q9P2U8 582 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 CHMP2BQ9UQN3 213 aa19.79■□□□□ 0.76
VTI1B-205ENST00000555543 KLHL20Q9Y2M5 609 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms