RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 WDR83Q9BRX9 315 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ULBP3Q9BZM4 244 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 AKIRIN1Q9H9L7 192 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 LATS2Q9NRM7 1088 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C1GALT1Q9NS00 363 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FGF21Q9NSA1 209 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 INTS10Q9NVR2 710 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KLHL20Q9Y2M5 609 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 MED16Q9Y2X0 877 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PCDHGA10Q9Y5H3 936 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SDK2Q58EX2 2172 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 H3BMM5 538 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KPNA5O15131 536 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 RAD51CO43502 376 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C1orf105O95561 183 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 DLGAP3O95886 979 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 NTRK1P04629 796 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 LIFP15018 202 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PEBP1P30086 187 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 BDKRB1P46663 353 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ATP1A2P50993 1020 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CLCN7P51798 805 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 GBX1Q14549 363 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TRADDQ15628 312 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZIC1Q15915 447 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SPESP1Q6UW49 350 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C6orf15Q6UXA7 325 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PPP1R3BQ86XI6 285 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ANKMY2Q8IV38 441 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZBTB2Q8N680 514 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 LINC01555Q8NAE3 123 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 NLGN4YQ8NFZ3 816 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 GSDMBQ8TAX9 411 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SNRNP27Q8WVK2 155 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 MENTQ9BUN1 341 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 DPH5Q9H2P9 285 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PDE7BQ9NP56 450 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SOHLH2Q9NX45 425 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 OR6C2Q9NZP2 312 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 RARRES3Q9UL19 164 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CHMP2BQ9UQN3 213 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TEX264Q9Y6I9 313 aa12.01□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ISM1B1AKI9 464 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 E5RI56 91 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 HCRTR1O43613 425 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TTC4O95801 387 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 AHSGP02765 367 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CTSBP07858 339 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 F8A1P23610 371 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PKLRP30613 574 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SHMT2P34897 504 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PGGT1BP53609 377 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ARL4CP56559 192 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TUBB4BP68371 445 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TIAL1Q01085 375 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ACY1Q03154 408 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CUL1Q13616 776 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TUBB2AQ13885 445 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FASTKD3Q14CZ7 662 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KLHL38Q2WGJ6 581 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 LARP7Q4G0J3 582 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SPANXN3Q5MJ09 141 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TMTC4Q5T4D3 741 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TEDDM1Q5T9Z0 273 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TRMT10BQ6PF06 316 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PCSK4Q6UW60 755 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 UNC5DQ6UXZ4 953 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CYHR1Q6ZMK1 362 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CDHR3Q6ZTQ4 885 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SLC38A9Q8NBW4 561 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C2CD4AQ8NCU7 369 aaPredicted RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 GIMAP7Q8NHV1 300 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CALML6Q8TD86 181 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZNF501Q96CX3 271 aaPredicted RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C16orf45Q96MC5 204 aaPredicted RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KCNK17Q96T54 332 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ERP44Q9BS26 406 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TUBB2BQ9BVA1 445 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PITPNM3Q9BZ71 974 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TWSG1Q9GZX9 223 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FAM60AQ9NP50 221 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PPANQ9NQ55 473 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZC3H7BQ9UGR2 993 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 IL17BQ9UHF5 180 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 LNPEPQ9UIQ6 1025 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 BTRCQ9Y297 605 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ATMQ13315 3056 aa12□□□□□ -0.49
TRAPPC6B-205ENST00000555269 IGSF10Q6WRI0 2623 aa11.99□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FAM187AA6NFU0 413 aa11.99□□□□□ -0.49
TRAPPC6B-205ENST00000555269 MATN2O00339 956 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms