RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SUPT7LO94864 414 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 C1orf105O95561 183 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 C8GP07360 202 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 SLC35G4P0C7Q5 338 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 KITP10721 976 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 ENGP17813 658 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 SLC1A6P48664 564 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 MAZP56270 477 aaKnown RBP10.47□□□□□ -0.73
TDP1-211ENST00000555178 HERVK_113P63132 956 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 SPEM2Q0P670 501 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 SETDB1Q15047 1291 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 TEAD4Q15561 434 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 ZNF423Q2M1K9 1284 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 UAP1L1Q3KQV9 507 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 DCBLD1Q8N8Z6 715 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 FAM174AQ8TBP5 190 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 TFGQ92734 400 aaPredicted RBP10.47□□□□□ -0.73
TDP1-211ENST00000555178 PYCR2Q96C36 320 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 RHBDF1Q96CC6 855 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 ERVK-6Q9BXR3 956 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 ATG10Q9H0Y0 220 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 XKR8Q9H6D3 395 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 SLC6A14Q9UN76 642 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 ASF1AQ9Y294 204 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 A0A1B0GTQ1 180 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 PRR5-ARHGAP8B1AHC4 643 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 TMEM233B4DJY2 109 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 TRIM38O00635 465 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 KLF11O14901 512 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 SLC16A8O95907 504 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 IMPDH1P20839 514 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 IDSP22304 550 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 MPSTP25325 297 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 NUBP1P53384 320 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 DNAJB13P59910 316 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 ABCE1P61221 599 aaKnown RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 ILF3Q12906 894 aaKnown RBP eCLIP10.46□□□□□ -0.732e-6■□□□□ 9.3
TDP1-211ENST00000555178 SP140Q13342 867 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 FASTKQ14296 549 aaKnown RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 ABRAXAS1Q6UWZ7 409 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 ZNF781Q8N8C0 355 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 SLC37A2Q8TED4 501 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 PRR11Q96HE9 360 aaPredicted RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 PKP4Q99569 1192 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 HGH1Q9BTY7 390 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 MENTQ9BUN1 341 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 ZBTB26Q9HCK0 441 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 SUSD2Q9UGT4 822 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 PTBP2Q9UKA9 531 aaKnown RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 BTBD3Q9Y2F9 522 aa10.46□□□□□ -0.73
TDP1-211ENST00000555178 TDRKHQ9Y2W6 561 aaKnown RBP10.46□□□□□ -0.73
TDP1-211ENST00000555178 E2F3O00716 465 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 NOBOXO60393 691 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 RPS17P08708 135 aaKnown RBP10.46□□□□□ -0.74
TDP1-211ENST00000555178 F3P13726 295 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 CYP2A7P20853 494 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 TGM1P22735 817 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 PRDX3P30048 256 aaKnown RBP10.46□□□□□ -0.74
TDP1-211ENST00000555178 ALDH18A1P54886 795 aaKnown RBP10.46□□□□□ -0.74
TDP1-211ENST00000555178 RPA4Q13156 261 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 RCN2Q14257 317 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 CFAP157Q5JU67 520 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 IYDQ6PHW0 289 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 FRMD7Q6ZUT3 714 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 SLC22A9Q8IVM8 553 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 SAP25Q8TEE9 199 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 L3HYPDHQ96EM0 354 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 ERVMER34-1Q9H9K5 563 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 RDH14Q9HBH5 336 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 SEMA4BQ9NPR2 832 aaPredicted RBP10.46□□□□□ -0.74
TDP1-211ENST00000555178 ABCF3Q9NUQ8 709 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 PNPOQ9NVS9 261 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 WWOXQ9NZC7 414 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 PCTPQ9UKL6 214 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 ACSL5Q9ULC5 683 aa10.46□□□□□ -0.74
TDP1-211ENST00000555178 CCDC189A1A4V9 331 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 HSPA4LO95757 839 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 CATP04040 527 aaKnown RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 MAP4P27816 1152 aaKnown RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 IMPA1P29218 277 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 EPHA8P29322 1005 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 RXRGP48443 463 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 HNRNPKP61978 463 aaKnown RBP eCLIP10.45□□□□□ -0.74
TDP1-211ENST00000555178 LRP8Q14114 963 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 ATG16L1Q676U5 607 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 TRPC4APQ8TEL6 797 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 ZDHHC1Q8WTX9 485 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 FOPNLQ96NB1 174 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 CDK15Q96Q40 435 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 FERD3LQ96RJ6 166 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 CCT8L2Q96SF2 557 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 GSDMCQ9BYG8 508 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 DRC3Q9H069 523 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 THAP1Q9NVV9 213 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 STOX2Q9P2F5 926 aaPredicted RBP10.45□□□□□ -0.74
TDP1-211ENST00000555178 PCOLCE2Q9UKZ9 415 aa10.45□□□□□ -0.74
TDP1-211ENST00000555178 MDC1Q14676 2089 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms