RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 ARMCX6Q7L4S7 300 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 MILR1Q7Z6M3 343 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 CHPFQ8IZ52 775 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 PROKR1Q8TCW9 393 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 MCUR1Q96AQ8 359 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 WDR34Q96EX3 536 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 DPEP2Q9H4A9 486 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 DYRK4Q9NR20 520 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ZIM2Q9NZV7 527 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SLC23A2Q9UGH3 650 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 BAIAP2L1Q9UHR4 511 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 POMPQ9Y244 141 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 PRRC2BQ5JSZ5 2229 aaKnown RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 H3BNX3 289 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 MAP3K7O43318 606 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 MBTPS2O43462 519 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 UGDHO60701 494 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 SMNDC1O75940 238 aaKnown RBP eCLIP8.66□□□□□ -1.02
TDP1-210ENST00000554976 EPB42P16452 691 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 HOXB9P17482 250 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 CASP2P42575 452 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ADPRHP54922 357 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CCINQ13939 588 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 E2F5Q15329 346 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 AGKQ53H12 422 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 SCIMPQ6UWF3 145 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 HPS6Q86YV9 775 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ARHGAP24Q8N264 748 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 MIER2Q8N344 545 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 HDDC3Q8N4P3 179 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CSGALNACT1Q8TDX6 532 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 NRG4Q8WWG1 115 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ASB12Q8WXK4 309 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 TUBGCP3Q96CW5 907 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ZNF514Q96K75 400 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 CCDC138Q96M89 665 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 EGFL8Q99944 293 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ACPTQ9BZG2 426 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 WDR41Q9HAD4 459 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 INTS7Q9NVH2 962 aaKnown RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 TRPM6Q9BX84 2022 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ENO4A6NNW6 628 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 AIM2O14862 343 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 EEDO75530 441 aaKnown RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 KRT36O76013 467 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CLDN9O95484 217 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ACPPP15309 386 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 THOP1P52888 689 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ROR2Q01974 943 aaKnown RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 RFTN2Q52LD8 501 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 KIAA1161Q6NSJ0 714 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 SLC30A9Q6PML9 568 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 HEATR4Q86WZ0 1026 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 GALNT13Q8IUC8 556 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 METTL6Q8TCB7 284 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 HM13Q8TCT9 377 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ROPN1LQ96C74 230 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 SLC25A23Q9BV35 468 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 SGPP1Q9BX95 441 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 ZCCHC2Q9C0B9 1178 aaKnown RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 C8orf33Q9H7E9 229 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 EFCAB1Q9HAE3 211 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 KCNK12Q9HB15 430 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CD93Q9NPY3 652 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 CCDC167Q9P0B6 97 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 FZD4Q9ULV1 537 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 L3MBTL1Q9Y468 752 aa8.66□□□□□ -1.02
TDP1-210ENST00000554976 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
TDP1-210ENST00000554976 NRP2O60462 931 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 KATNA1O75449 491 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PDE5AO76074 875 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PDYNP01213 254 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 DRD1P21728 446 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 JAK1P23458 1154 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 IGFALSP35858 605 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 CCR3P51677 355 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 UFM1P61960 85 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 MRPS21P82921 87 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 USP39Q53GS9 565 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 C6orf10Q5SRN2 563 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 KBTBD6Q86V97 674 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 ZFAND4Q86XD8 727 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 B4GALNT2Q8NHY0 566 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 TWSG1Q9GZX9 223 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 DCLRE1BQ9H816 532 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 SH2B3Q9UQQ2 575 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 SLC22A14Q9Y267 594 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 TMEM98Q9Y2Y6 226 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PIAS3Q9Y6X2 628 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PCM1Q15154 2024 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 A0A1W2PPC1 479 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 MGAT4DA6NG13 374 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms