RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 KIAA1324Q6UXG2 1013 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 Q6ZNB5 142 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 CIR1Q86X95 450 aaPredicted RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 PTRH1Q86Y79 214 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 TBC1D21Q8IYX1 336 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 CHPFQ8IZ52 775 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 TEX26Q8N6G2 289 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 NAT16Q8N8M0 369 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 PAPD5Q8NDF8 572 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 AGR3Q8TD06 166 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 IGSF8Q969P0 613 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 TADA1Q96BN2 335 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 NMD3Q96D46 503 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 ERLEC1Q96DZ1 483 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 MED8Q96G25 268 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 NPAS2Q99743 824 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 TMEM79Q9BSE2 394 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 C1QTNF3Q9BXJ4 246 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 SDR39U1Q9NRG7 319 aaPredicted RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 USP36Q9P275 1121 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 EIF2B4Q9UI10 523 aaKnown RBP10.91□□□□□ -0.66
SRP54-205ENST00000554803 COMMD10Q9Y6G5 202 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 CEPT1Q9Y6K0 416 aa10.91□□□□□ -0.66
SRP54-205ENST00000554803 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 DHRS12A0PJE2 317 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 H0YAE9 185 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 STX16-NPEPL1H3BU86 382 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 STX16O14662 325 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 HTRA2O43464 458 aaPredicted RBP10.9□□□□□ -0.66
SRP54-205ENST00000554803 TSPAN3O60637 253 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 RFPL3O75679 317 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 DNAJB5O75953 348 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CNTN5O94779 1100 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 HLA-DQB2P05538 268 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 C1SP09871 688 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 LBPP18428 481 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 SAT1P21673 171 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 GPX3P22352 226 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 FDXRP22570 491 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CES1P23141 567 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CCT8P50990 548 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 AFF3P51826 1226 aaKnown RBP10.9□□□□□ -0.66
SRP54-205ENST00000554803 UCNP55089 124 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 PRAMEP78395 509 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 IL10RBQ08334 325 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 SPIDRQ14159 915 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CSHL1Q14406 222 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 KIF19Q2TAC6 998 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 INAVAQ3KP66 663 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 NHSL2Q5HYW2 709 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 C6orf10Q5SRN2 563 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 C6orf52Q5T4I8 152 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 MARC1Q5VT66 337 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 KANK2Q63ZY3 851 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 TMEM198Q66K66 360 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 FBXL22Q6P050 247 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 GK5Q6ZS86 529 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 LINC00299Q6ZSB3 139 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 HTR3DQ70Z44 454 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 GPR141Q7Z602 305 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 DENND6AQ8IWF6 608 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 BBS7Q8IWZ6 715 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 TP53INP2Q8IXH6 220 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 LGI2Q8N0V4 545 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CFAP52Q8N1V2 620 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 BBS5Q8N3I7 341 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 METTL25Q8N6Q8 603 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 PDPRQ8NCN5 879 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 ACVR1CQ8NER5 493 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 SGF29Q96ES7 293 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 APOL2Q9BQE5 337 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 SLC39A8Q9C0K1 460 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 COQ10BQ9H8M1 238 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 PLGRKTQ9HBL7 147 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 ITM2CQ9NQX7 267 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 AGPAT4Q9NRZ5 378 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 TMEM248Q9NWD8 314 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 MPP6Q9NZW5 540 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 APPL1Q9UKG1 709 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 CNOT6Q9ULM6 557 aaKnown RBP10.9□□□□□ -0.66
SRP54-205ENST00000554803 SNX13Q9Y5W8 968 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 SNX11Q9Y5W9 270 aa10.9□□□□□ -0.66
SRP54-205ENST00000554803 ABCA12Q86UK0 2595 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 TTC24A2A3L6 582 aaPredicted RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 PRORSD1PA6NEY8 169 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 GFRA2O00451 464 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 FBP2O00757 339 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 AZIN1O14977 448 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 RASAL1O95294 804 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 MLYCDO95822 493 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 PSMA3P25788 255 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 MAPKAPK2P49137 400 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SLC11A2P49281 568 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 ERFP50548 548 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 CDKL1Q00532 357 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 LCP2Q13094 533 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms