RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LRRC37A2A6NM11 1700 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TRANK1O15050 2925 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PHIPQ8WWQ0 1821 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CHD8Q9HCK8 2581 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ANKRD11Q6UB99 2663 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 FASNP49327 2511 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MYH13Q9UKX3 1938 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PTPRCP08575 1304 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PDS5AQ29RF7 1337 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MAP3K15Q6ZN16 1313 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CDK5RAP2Q96SN8 1893 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MID1O15344 667 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZBTB43O43298 467 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PMS2P2O95744 297 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DNTTP04053 509 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TPOP07202 933 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LINC00271P0C7V0 271 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PRLRP16471 622 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 IL11P20809 199 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 S1PR1P21453 382 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 HRH2P25021 359 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CORO1AP31146 461 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PRKAR2BP31323 418 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TMPOP42166 694 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CLDN20P56880 219 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 BRWD1-AS2P59051 145 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 UBXN2AP68543 259 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PRPF4BQ13523 1007 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GRAPQ13588 217 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KRT33BQ14525 404 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MVPQ14764 893 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SF3B4Q15427 424 aaKnown RBP eCLIP1.48□□□□□ -2.174e-6■■■□□ 18.3
PRPF39-208ENST00000554785 SHHQ15465 462 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MEP1AQ16819 746 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LRRC26Q2I0M4 334 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LRIT3Q3SXY7 679 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KRTCAP3Q53RY4 240 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF628Q5EBL2 1059 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZDHHC20Q5W0Z9 365 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 NADSYN1Q6IA69 706 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TRNP1Q6NT89 227 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CREB3L2Q70SY1 520 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KRT74Q7RTS7 529 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PPP1R42Q7Z4L9 355 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CEP97Q8IW35 865 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MAP7D3Q8IWC1 876 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MINDY1Q8N5J2 469 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GCSAMQ8N6F7 178 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ANKRD13CQ8N6S4 541 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 POMGNT2Q8NAT1 580 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SLC38A9Q8NBW4 561 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ACVR1CQ8NER5 493 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 THAP6Q8TBB0 222 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TBC1D16Q8TBP0 767 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GRAPLQ8TC17 118 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DUSP19Q8WTR2 217 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PTPMT1Q8WUK0 201 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ABTB1Q969K4 478 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PIGTQ969N2 578 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TMCO6Q96DC7 493 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM19Q96HH6 336 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF385AQ96PM9 386 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SMC6Q96SB8 1091 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ABHD1Q96SE0 405 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GFI1Q99684 422 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MRPL1Q9BYD6 325 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TXLNGYQ9BZA5 131 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TM6SF1Q9BZW5 370 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KLHL4Q9C0H6 718 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 IL25Q9H293 177 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KCNK15Q9H427 330 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CD93Q9NPY3 652 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SLC35C2Q9NQQ7 365 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF224Q9NZL3 707 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 THEGQ9P2T0 379 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 AMACRQ9UHK6 382 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TSPYL4Q9UJ04 414 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KCNS2Q9ULS6 477 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PPIEQ9UNP9 301 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF148Q9UQR1 794 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 B3GALT5Q9Y2C3 310 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM184BQ9Y519 407 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PCDHGA5Q9Y5G8 931 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SETXQ7Z333 2677 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 COL12A1Q99715 3063 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 FAM186AA6NE01 2351 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MYO7AQ13402 2215 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 KIF24Q5T7B8 1368 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF318Q5VUA4 2279 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ARAP2Q8WZ64 1704 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LOC102723996A0A087X1L8 192 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 GPR75-ASB3A0A0A6YYF3 556 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A0A0G2JPF8 293 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 hCG_1809904A0A1W2PP81 198 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1W2PPE2 198 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1W2PR64 198 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LILRA5A6NI73 299 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A6NL46 340 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SRRM3A6NNA2 597 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms