RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 C6orf136Q5SQH8 315 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 CORO6Q6QEF8 472 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 MEX3BQ6ZN04 569 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 PLEKHM3Q6ZWE6 761 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 CCDC170Q8IYT3 715 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 MAB21L3Q8N8X9 362 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 L3MBTL4Q8NA19 623 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 PAPD5Q8NDF8 572 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 OR13J1Q8NGT2 312 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 MOSPD2Q8NHP6 518 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 OLIG1Q8TAK6 271 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 RNF128Q8TEB7 428 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 UBE2Q2Q8WVN8 375 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 SSMEM1Q8WWF3 244 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 NR4A3Q92570 626 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 NSMAFQ92636 917 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 THOC1Q96FV9 657 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 NODALQ96S42 347 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 NEURL2Q9BR09 285 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 TUBB2BQ9BVA1 445 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 GTPBP2Q9BX10 602 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 SLC2A11Q9BYW1 496 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 RSPH9Q9H1X1 276 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 RAB9BQ9NP90 201 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 TCF7L2Q9NQB0 619 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 SERINC1Q9NRX5 453 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ABCF3Q9NUQ8 709 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 SLC38A7Q9NVC3 462 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 DDX43Q9NXZ2 648 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 POU2F3Q9UKI9 436 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 TMED3Q9Y3Q3 217 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ZFP37Q9Y6Q3 630 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 GREB1LQ9C091 1923 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 A0A0U1RQK1 487 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF320A2RRD8 509 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 NEMP2A6NFY4 417 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 C15orf62A8K5M9 175 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 DNM1LO00429 736 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 WDR46O15213 610 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 GRID2O43424 1007 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 BUD23O43709 281 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 WDPCPO95876 746 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 GSRP00390 522 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 PLGP00747 810 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 H1F0P07305 194 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 ZFYP08048 801 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 CSF2RAP15509 400 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 MCCP23508 829 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 EPHA2P29317 976 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 CDC25CP30307 473 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 AHRP35869 848 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 IL15P40933 162 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 LHX1P48742 406 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 GSDMDP57764 484 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 PTENP60484 403 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 EEF1A1P68104 462 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 KRT83P78385 493 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 C17orf67Q0P5P2 114 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 RRS1Q15050 365 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 UGP2Q16851 508 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 DUOXA1Q1HG43 343 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 SYT14P1Q58G82 188 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 NHSL2Q5HYW2 709 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 GFI1BQ5VTD9 330 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 EEF1A1P5Q5VTE0 462 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 FAM109BQ6ICB4 259 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 TMEM182Q6ZP80 229 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 KCTD8Q6ZWB6 473 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 OTOAQ7RTW8 1153 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 PIWIL3Q7Z3Z3 882 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 ABI3BPQ7Z7G0 1075 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 LONP2Q86WA8 852 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 KLHL7Q8IXQ5 586 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 CPSF7Q8N684 471 aaKnown RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 LMNTD1Q8N9Z9 388 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 OCC1Q8TAD7 63 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 FGFBP3Q8TAT2 258 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 GDAP1Q8TB36 358 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 HEXDCQ8WVB3 486 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 CORO2AQ92828 525 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 FAM162AQ96A26 154 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 RMDN2Q96LZ7 410 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 RAD9AQ99638 391 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 LRRC1Q9BTT6 524 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 VN1R1Q9GZP7 353 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 MMP28Q9H239 520 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 COPS7BQ9H9Q2 264 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-213ENST00000554776 FKRPQ9H9S5 495 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 SDF2L1Q9HCN8 221 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 DNAJC4Q9NNZ3 241 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 A4GALTQ9NPC4 353 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 ZFP57Q9NU63 452 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 STK26Q9P289 416 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 LRWD1Q9UFC0 647 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 MTUS1Q9ULD2 1270 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms