RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF716A6NP11 495 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 I3L1I5 382 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CDX4O14627 284 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 KIAA0391O15091 583 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MT-ATP6P00846 226 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 IL1BP01584 269 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 OPN1LWP04000 364 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ITGB3P05106 788 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CLEC3BP05452 202 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CLEC2LP0C7M8 214 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF735P0CB33 412 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 OR8G3PP0DMU2 310 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MLNP12872 115 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CALB2P22676 271 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 IGFBP6P24592 240 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PTAFRP25105 342 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PTPN4P29074 926 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 NMT1P30419 496 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RRM2P31350 389 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PNPLA4P41247 253 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 GPR4P46093 362 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CYP4F2P78329 520 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SLC7A9P82251 487 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 GTF2BQ00403 316 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 FMO1Q01740 532 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SEMA3BQ13214 749 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RUNX3Q13761 415 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MORF4L2Q15014 288 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 STX1AQ16623 288 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MEP1BQ16820 701 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF568Q3ZCX4 644 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 AASDHQ4L235 1098 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TCP11X2Q5H9J9 407 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 LDLRAP1Q5SW96 308 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 AGBL2Q5U5Z8 902 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ARL6IP4Q66PJ3 421 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TSSK4Q6SA08 328 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 KLHL17Q6TDP4 642 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 DNAAF5Q86Y56 855 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 YAF2Q8IY57 180 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZZZ3Q8IYH5 903 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ELMOD2Q8IZ81 293 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SELENOHQ8IZQ5 122 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM86AQ8N2M4 240 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF276Q8N554 614 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 OXR1Q8N573 874 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SH2D3CQ8N5H7 860 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 GLIS1Q8NBF1 620 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SETD6Q8TBK2 473 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 FAM71BQ8TC56 605 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CKAP2Q8WWK9 683 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SELENOMQ8WWX9 145 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 NT5C3BQ969T7 300 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 OTUB2Q96DC9 234 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RRNAD1Q96FB5 475 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PIWIL1Q96J94 861 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJC1Q96KC8 554 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 FIZ1Q96SL8 496 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 P2RY13Q9BPV8 354 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC28BQ9BUN5 200 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ACE2Q9BYF1 805 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 RAB34Q9BZG1 259 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 HAPLN2Q9GZV7 340 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SCAND2PQ9GZW5 306 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MFFQ9GZY8 342 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CRISPLD1Q9H336 500 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SAMSN1Q9NSI8 373 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 THAP1Q9NVV9 213 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP20Q9P2F6 1191 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 VPS51Q9UID3 782 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PACSIN2Q9UNF0 486 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TSC22D4Q9Y3Q8 395 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 AP4B1Q9Y6B7 739 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 USP24Q9UPU5 2620 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 GOLGA8QA0A0J9YX86 632 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 DBX1A6NMT0 343 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 IQCF5A8MTL0 148 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 BTBD18B2RXH4 712 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 WRBO00258 174 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PGRMC1O00264 195 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 STX16O14662 325 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 XPO1O14980 1071 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 SLC16A3O15427 465 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PRPF4O43172 522 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TEX33O43247 280 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TLX3O43711 291 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 DLX3O60479 287 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 PFDN1O60925 122 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CILPO75339 1184 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 NME6O75414 186 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MYO1DO94832 1006 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF202O95125 648 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 IGLV3-19P01714 112 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 LINGO3P0C6S8 592 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 EPORP19235 508 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 CMA1P23946 247 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 TBXAS1P24557 533 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 MC5RP33032 325 aa2.66□□□□□ -1.98
PRPF39-206ENST00000554429 ATP5C1P36542 298 aaKnown RBP2.66□□□□□ -1.98
PRPF39-206ENST00000554429 P2RY2P41231 377 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms