RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 LRRC70Q7Z2Q7 622 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SYTL1Q8IYJ3 562 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 TEX9Q8N6V9 391 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 FAM46DQ8NEK8 389 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 OR5AR1Q8NGP9 310 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ZFPM2Q8WW38 1151 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ZNF317Q96PQ6 595 aaPredicted RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 PKP4Q99569 1192 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 HGH1Q9BTY7 390 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 C1QTNF3Q9BXJ4 246 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 TRIM55Q9BYV6 548 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SLC32A1Q9H598 525 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 PFDN4Q9NQP4 134 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 FGFR1OP2Q9NVK5 253 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SPATA7Q9P0W8 599 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 TAAR2Q9P1P5 351 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 WDR37Q9Y2I8 494 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 RAP2CQ9Y3L5 183 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 CFAP20Q9Y6A4 193 aaKnown RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SLCO1B1Q9Y6L6 691 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 TECTAO75443 2155 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ATXN2Q99700 1313 aaKnown RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 PRR19A6NJB7 356 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 MYO1CO00159 1063 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 NDUFAB1O14561 156 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 YKT6O15498 198 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TAPBPO15533 448 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 AQP9O43315 295 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 WDR47O94967 919 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SIX3O95343 332 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TGDSO95455 350 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 FAM107AO95990 144 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 OTCP00480 354 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 VIPP01282 170 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CFIP05156 583 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 RPS17P08708 135 aaKnown RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 AGTR2P50052 363 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 PNLIPRP1P54315 467 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 LCP2Q13094 533 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 C1orf61Q13536 156 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 NAE1Q13564 534 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TSTA3Q13630 321 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 GTF2H2Q13888 395 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CLCA4Q14CN2 919 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 KIF19Q2TAC6 998 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 THEMIS2Q5TEJ8 643 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CAPN13Q6MZZ7 669 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 GTF2H2CQ6P1K8 395 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 IYDQ6PHW0 289 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 IL27RAQ6UWB1 636 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 FRMD7Q6ZUT3 714 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SLC9B2Q86UD5 537 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 NRROSQ86YC3 692 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 RBM12BQ8IXT5 1001 aaKnown RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SNX31Q8N9S9 440 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 OR6Y1Q8NGX8 325 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CCL4L1Q8NHW4 92 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TRPC4APQ8TEL6 797 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 UBTD2Q8WUN7 234 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SH3KBP1Q96B97 665 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 MED8Q96G25 268 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 LOXL4Q96JB6 756 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 FAR2Q96K12 515 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 MAGEB10Q96LZ2 347 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CAMK1GQ96NX5 476 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 CCT8L2Q96SF2 557 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 ELF4Q99607 663 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 MIPEPQ99797 713 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 PRRX2Q99811 253 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 LRRC61Q9BV99 259 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 ATG10Q9H0Y0 220 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TCEAL2Q9H3H9 227 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SLCO1B3Q9NPD5 702 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 POT1Q9NUX5 634 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 DNAJC11Q9NVH1 559 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 STOX2Q9P2F5 926 aaPredicted RBP10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 KLF15Q9UIH9 416 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 PCTPQ9UKL6 214 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 SLC6A14Q9UN76 642 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 BPTFQ12830 3046 aa10.17□□□□□ -0.78
TMEM55B-205ENST00000554028 TRBV23OR9-2A0A075B6M9 112 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 OR52A4PA6NMU1 304 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 CLGNO14967 610 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 ITM2AO43736 263 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 SLC16A8O95907 504 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 CHEK2O96017 543 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 SYPP08247 313 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 XRCC1P18887 633 aaPredicted RBP10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 SHMT2P34897 504 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 CTSKP43235 329 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 RXRGP48443 463 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 RPL14P50914 215 aaKnown RBP10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 CCNG1P51959 295 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 CDH13P55290 713 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 PKNOX1P55347 436 aa10.16□□□□□ -0.78
TMEM55B-205ENST00000554028 OCRLQ01968 901 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms