RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MAML2Q8IZL2 1156 aaPredicted RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 BMPERQ8N8U9 685 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 NPEPL1Q8NDH3 523 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 OR5M8Q8NGP6 311 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 OR2T11Q8NH01 316 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 OR52N5Q8NH56 324 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 BARD1Q99728 777 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 FUCA2Q9BTY2 467 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 TRAF4Q9BUZ4 470 aaPredicted RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 FNDC11Q9BVV2 318 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 FGFBP2Q9BYJ0 223 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 PANK2Q9BZ23 570 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 TRIM15Q9C019 465 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 TRPV4Q9HBA0 871 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 EQTNQ9NQ60 294 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 DPP3Q9NY33 737 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 MRPL15Q9P015 296 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 B3GAT1Q9P2W7 334 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 MORF4L1Q9UBU8 362 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 ADD3Q9UEY8 706 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 DDX25Q9UHL0 483 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 PTRH2Q9Y3E5 179 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 SNX8Q9Y5X2 465 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 MYH15Q9Y2K3 1946 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 A0A0J9YWU9 116 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 TCRBV21S2A2A0A5A6 115 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ANKRD61A6NGH8 418 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 KRTAP16-1A8MUX0 517 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 H7C423 109 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 EXTL3O43909 919 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 GLRA3O75311 464 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 CDC123O75794 336 aaPredicted RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 ZWINTO95229 277 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 GPIP06744 558 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 LINGO3P0C6S8 592 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 TRIM49P0CI25 452 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 TRIM49CP0CI26 452 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 GABRA5P31644 462 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 EIF2DP41214 584 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 LMAN1P49257 510 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 TAF6P49848 677 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ZNF75DP51815 510 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 SNX16P57768 344 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 UBXN2AP68543 259 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 MAT1AQ00266 395 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 RRS1Q15050 365 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 SGSM1Q2NKQ1 1148 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ITPRIPL2Q3MIP1 535 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 XKR6Q5GH73 641 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ELFN2Q5R3F8 820 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 RNASEH2BQ5TBB1 312 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 PWWP2BQ6NUJ5 590 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 FIP1L1Q6UN15 594 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 DNAAF5Q86Y56 855 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ZNF440Q8IYI8 595 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 FBXO39Q8N4B4 442 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 TDRD5Q8NAT2 981 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 DBF4BQ8NFT6 615 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 OR10G8Q8NGN5 311 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 OLIG1Q8TAK6 271 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ZNRF4Q8WWF5 429 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 ZNF689Q96CS4 500 aaPredicted RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 TMCO6Q96DC7 493 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 MAGED4Q96JG8 741 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 SEPHS2Q99611 448 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 RAD9AQ99638 391 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 SYT15Q9BQS2 421 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 CHMP4AQ9BY43 222 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 A4GALTQ9NPC4 353 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 PIH1D3Q9NQM4 214 aaKnown RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 PLCXD1Q9NUJ7 323 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 OSER1Q9NX31 292 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 CRNNQ9UBG3 495 aaPredicted RBP2.89□□□□□ -1.95
VRK1-202ENST00000553683 TUBE1Q9UJT0 475 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 MAN1B1Q9UKM7 699 aa2.89□□□□□ -1.95
VRK1-202ENST00000553683 IGLV7-46A0A075B6I9 117 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 ZNF197O14709 1029 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 CDK2AP2O75956 126 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 KRT33AO76009 404 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 NR2F1P10589 423 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 GP1BBP13224 206 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 MTHFRP42898 656 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 MATR3P43243 847 aaKnown RBP eCLIP2.88□□□□□ -1.95
VRK1-202ENST00000553683 HUNKP57058 714 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 B3GALT5-AS1P59052 145 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 HSPB3Q12988 150 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 ODF4Q2M2E3 257 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 IGSF11Q5DX21 431 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 TCTE1Q5JU00 501 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 TEX38Q6PEX7 206 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 BHLHB9Q6PI77 547 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 FAM114A1Q8IWE2 563 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 KIRREL3Q8IZU9 778 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 LYG1Q8N1E2 194 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 ARHGAP24Q8N264 748 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 TMEM178AQ8NBL3 297 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 OR2T6Q8NHC8 308 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 SSMEM1Q8WWF3 244 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
VRK1-202ENST00000553683 SYT11Q9BT88 431 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms