RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TRABDQ9H4I3 376 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 MVB12BQ9H7P6 319 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 SMOXQ9NWM0 555 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 EURLQ9NYK6 297 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 COQ3Q9NZJ6 369 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 IL17CQ9P0M4 197 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 ABCA4P78363 2273 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 NSG1A0A0A6YYJ2 146 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 A0A0J9YY10 115 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 FAM227AF5H4B4 570 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 IFRD1O00458 451 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-204ENST00000553605 WFS1O76024 890 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRPF39-204ENST00000553605 BMP10O95393 424 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 MLYCDO95822 493 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 SERPINA7P05543 415 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 NSG1P42857 185 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 SLC10A2Q12908 348 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-204ENST00000553605 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 KRT31Q15323 416 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 ATG9BQ674R7 924 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 HIBCHQ6NVY1 386 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-204ENST00000553605 NDUFAF7Q7L592 441 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 BIVMQ86UB2 503 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 SPATA3Q8NHX4 192 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 AGAP11Q8TF27 550 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 CEP41Q9BYV8 373 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 RNF32Q9H0A6 362 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
PRPF39-204ENST00000553605 OR5H15A6NDH6 313 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 E9PLN8 166 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 GAPDHSO14556 408 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-204ENST00000553605 DSCR3O14972 297 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 SGTAO43765 313 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 OR1D4P47884 311 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 CD151P48509 253 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 ARSEP51690 589 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 KLC1Q07866 573 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 CEBPEQ15744 281 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 SLC14A2Q15849 920 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 TFDP3Q5H9I0 405 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 UNC5AQ6ZN44 842 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 FLVCR1-AS1Q8TAF5 88 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 DMRTA2Q96SC8 542 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 CUTCQ9NTM9 273 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 SPHK1Q9NYA1 384 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 ICKQ9UPZ9 632 aa13.21□□□□□ -0.29
PRPF39-204ENST00000553605 KIAA1324LA8MWY0 1029 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 CHRM5P08912 532 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 COX6A1P12074 109 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 GZMAP12544 262 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 ABOP16442 354 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 SHMT2P34897 504 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 RAB28P51157 221 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 FANCCQ00597 558 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 ALDH6A1Q02252 535 aaKnown RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 BOP1Q14137 746 aaKnown RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 ZNF766Q5HY98 468 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 DOLPP1Q86YN1 238 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 MCATQ8IVS2 390 aaKnown RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 DMRTC2Q8IXT2 367 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 SMR3AQ99954 134 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 TSPAN10Q9H1Z9 355 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-204ENST00000553605 STMN3Q9NZ72 180 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 C3orf18Q9UK00 162 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 PPT2Q9UMR5 302 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
PRPF39-204ENST00000553605 NPIPA5E9PKD4 350 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 ADAM10O14672 748 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 ZWINTO95229 277 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 MYBL1P10243 752 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 PDHA2P29803 388 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
PRPF39-204ENST00000553605 ADAM8P78325 824 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 OCA2Q04671 838 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 AP1B1Q10567 949 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 OLIG2Q13516 323 aa13.19□□□□□ -0.3
PRPF39-204ENST00000553605 DSG2Q14126 1118 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms