RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 DCAF10Q5QP82 559 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 FAM182AQ5T1J6 154 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 SFRP5Q5T4F7 317 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 KLHL35Q6PF15 583 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 OOSP2Q86WS3 158 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 CPNE8Q86YQ8 564 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 RAB43Q86YS6 212 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 GALNT16Q8N428 558 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 PQLC3Q8N755 202 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 OR1L3Q8NH93 324 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 TADA1Q96BN2 335 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 MOCOSQ96EN8 888 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 SGSM3Q96HU1 749 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 COX4I2Q96KJ9 171 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 ZNF670Q9BS34 389 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 ILKAPQ9H0C8 392 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-219ENST00000553488 ISCUQ9H1K1 167 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 NUP62CLQ9H1M0 184 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 HAUS4Q9H6D7 363 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 ZBTB20Q9HC78 741 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-219ENST00000553488 MAGEE1Q9HCI5 957 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 MRPL47Q9HD33 250 aaKnown RBP7.06□□□□□ -1.28
ATXN3-219ENST00000553488 MBNL3Q9NUK0 354 aaKnown RBP7.06□□□□□ -1.28
ATXN3-219ENST00000553488 HRASLS2Q9NWW9 162 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 MYO1AQ9UBC5 1043 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 SLC24A2Q9UI40 661 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 POMT2Q9UKY4 750 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 PSMD13Q9UNM6 376 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 SPO11Q9Y5K1 396 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 CSAG2Q9Y5P2 127 aa7.06□□□□□ -1.28
ATXN3-219ENST00000553488 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 LRRC10BA6NIK2 292 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 TMEM150CB9EJG8 249 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 F5H423 210 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 H3BMH7 237 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KCNK1O00180 336 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 MASP2O00187 686 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 GAPDHSO14556 408 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 LRRTM2O43300 516 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ZG16O60844 167 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KCNJ13O60928 360 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 CNOT3O75175 753 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 RNASE1P07998 156 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 VCLP18206 1134 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ARCN1P48444 511 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 SOX8P57073 446 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 PPIDQ08752 370 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 MPP2Q14168 576 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 PIGHQ14442 188 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KRT81Q14533 505 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 LLGL1Q15334 1064 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KYNUQ16719 465 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ANO6Q4KMQ2 910 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 TMTC4Q5T4D3 741 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 LYPLAL1Q5VWZ2 237 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 AMZ2Q86W34 360 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KCNMB4Q86W47 210 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 TMEM151BQ8IW70 566 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 MCEMP1Q8IX19 187 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 RASGEF1AQ8N9B8 481 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 DDHD1Q8NEL9 900 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 DTX3LQ8TDB6 740 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ASB11Q8WXH4 323 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 CLIP3Q96DZ5 547 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 IMP4Q96G21 291 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 RMDN2Q96LZ7 410 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 DPH2Q9BQC3 489 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 DHRS4Q9BTZ2 278 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ADGRE3Q9BY15 652 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 PITPNM3Q9BZ71 974 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 KIR3DX1Q9H7L2 352 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ACTR5Q9H9F9 607 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 IMP3Q9NV31 184 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 HAUS2Q9NVX0 235 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 SOHLH2Q9NX45 425 aa7.05□□□□□ -1.28
ATXN3-219ENST00000553488 COPG1Q9Y678 874 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 CFAP20Q9Y6A4 193 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 ANKHD1Q8IWZ3 2542 aaKnown RBP7.05□□□□□ -1.28
ATXN3-219ENST00000553488 OR6C74A6NCV1 312 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 SLC9B1P1A6NJY1 282 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 POP7O75817 140 aaKnown RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ALPPP05187 535 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ST6GAL1P15907 406 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 HLA-DPA1P20036 260 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 VAMP1P23763 118 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ITGA3P26006 1051 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 OTX2P32243 289 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 HMGCLP35914 325 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 HADHAP40939 763 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 TSFMP43897 325 aaKnown RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 PER3P56645 1201 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 FOXL2P58012 376 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 GTF2H3Q13889 308 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ASIC2Q16515 512 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 CCDC122Q5T0U0 273 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 METRNLQ641Q3 311 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms