RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CLDN8P56748 225 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
SHMT2-205ENST00000553474 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 KCNC3Q14003 757 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 DPY19L1Q2PZI1 675 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 C18orf21Q32NC0 220 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-205ENST00000553474 FAM174BQ3ZCQ3 159 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 DGKKQ5KSL6 1271 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 GAREM2Q75VX8 874 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 GPR141Q7Z602 305 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 BBS7Q8IWZ6 715 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 RGL4Q8IZJ4 473 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ELMOD1Q8N336 334 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 GPR26Q8NDV2 337 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF548Q8NEK5 533 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-205ENST00000553474 FAM110BQ8TC76 370 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 SDCCAG3Q96C92 435 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-205ENST00000553474 LMLNQ96KR4 655 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 PRO3102Q9H379 93 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 MAN2B2Q9Y2E5 1009 aa12.62□□□□□ -0.39
SHMT2-205ENST00000553474 MYOCOSA0A1B0GUC4 107 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ELOVL7A1L3X0 281 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LOC730098B7Z3J9 87 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 H3BSA7 217 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 GSTA4O15217 222 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 UGDHO60701 494 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 AOAHP28039 575 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CA8P35219 290 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 NRIP1P48552 1158 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 MTPNP58546 118 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 DMC1Q14565 340 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 USP39Q53GS9 565 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CCNYL2Q5T2Q4 361 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LRIF1Q5T3J3 769 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LRRC66Q68CR7 880 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LPCAT2Q7L5N7 544 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TMC8Q8IU68 726 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LIX1Q8N485 282 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 L3MBTL4Q8NA19 623 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 MAGEE2Q8TD90 523 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TESCQ96BS2 214 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 METTL2AQ96IZ6 378 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 VPS50Q96JG6 964 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 SEPHS2Q99611 448 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 THUMPD3Q9BV44 507 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TRIM8Q9BZR9 551 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 KCNH6Q9H252 994 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 SLC28A3Q9HAS3 691 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ARL15Q9NXU5 204 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 VAPAQ9P0L0 249 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 NEUROG3Q9Y4Z2 214 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ATG2AQ2TAZ0 1938 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TRBV5-3A0A0A0MS03 114 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 SOBPA7XYQ1 873 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 FAM220BPB1ANY3 271 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 PLOD2O00469 737 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 AP2A2O94973 939 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 FGF19O95750 216 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ALPLP05186 524 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 GNAO1P09471 354 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 LINC00271P0C7V0 271 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ITGB6P18564 788 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 DDX6P26196 483 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 9.6
SHMT2-205ENST00000553474 SLC5A2P31639 672 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CD70P32970 193 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 MAPK9P45984 424 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 DGKQP52824 942 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 NUP107P57740 925 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 DCDC1P59894 354 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 PTSQ03393 145 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 DAG1Q14118 895 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CBX2Q14781 532 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 PTGR1Q14914 329 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 PLA2G4EQ3MJ16 856 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TTC23Q5W5X9 447 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ZSWIM9Q86XI8 627 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 ZDHHC13Q8IUH4 622 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TMEM132CQ8N3T6 1108 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CLP1Q92989 425 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 CMTM7Q96FZ5 175 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 USE1Q9NZ43 259 aa12.61□□□□□ -0.39
SHMT2-205ENST00000553474 NFKBIL1Q9UBC1 381 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 INTS6Q9UL03 887 aaKnown RBP12.61□□□□□ -0.39
SHMT2-205ENST00000553474 A0A096LPI6 279 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 C16orf96A6NNT2 1141 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms