RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TBK1Q9UHD2 729 aa14.4□□□□□ -0.1
MTHFD1-204ENST00000553405 NOVA2Q9UNW9 492 aaKnown RBP14.4□□□□□ -0.1
MTHFD1-204ENST00000553405 ACOT9Q9Y305 439 aa14.4□□□□□ -0.1
MTHFD1-204ENST00000553405 MN1Q10571 1320 aaPredicted RBP14.4□□□□□ -0.1
MTHFD1-204ENST00000553405 CEP295Q9C0D2 2601 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 A0A1W2PPV9 198 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 FAM221BA6H8Z2 402 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 OR5K3A6NET4 321 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 D6RAR5 112 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 UBXN7O94888 489 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 KLHL2O95198 593 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 CATP04040 527 aaKnown RBP14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 RPN2P04844 631 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 MPOP05164 745 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 PROS1P07225 676 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 HOXB3P14651 431 aaPredicted RBP14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ALDH4A1P30038 563 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 RAB28P51157 221 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 CLDN6P56747 220 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ATP6V0D1P61421 351 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 TSNQ15631 228 aaKnown RBP14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 CLPPQ16740 277 aaPredicted RBP14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 LGSNQ5TDP6 509 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 DHRS13Q6UX07 377 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 LRIG3Q6UXM1 1119 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 MBOAT1Q6ZNC8 495 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 OR9A1PQ8NGU1 263 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ZNF480Q8WV37 535 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 LCN9Q8WX39 176 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 KIAA1191Q96A73 305 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 FOPNLQ96NB1 174 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ATOH8Q96SQ7 321 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 TMEM9Q9P0T7 183 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 EPHA6Q9UF33 1036 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ATXN7L1Q9ULK2 861 aaPredicted RBP14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 WASF3Q9UPY6 502 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ASPMQ8IZT6 3477 aa14.39□□□□□ -0.11
MTHFD1-204ENST00000553405 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 AKAP13Q12802 2813 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 PTPRBP23467 1997 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SNRNP200O75643 2136 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 BTN3A1O00481 513 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 CPNE6O95741 557 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SLC16A8O95907 504 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 C9P02748 559 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ENO2P09104 434 aaPredicted RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 LTA4HP09960 611 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SBK3P0C264 359 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 MTHFD2P13995 350 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 TYRP1P17643 537 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 IMPA1P29218 277 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SHMT2P34897 504 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 GFERP55789 205 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 E2F1Q01094 437 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ZFP36L1Q07352 338 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 CASP8Q14790 479 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 WDR74Q6RFH5 385 aaPredicted RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 RAPH1Q70E73 1250 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 RAB44Q7Z6P3 723 aaPredicted RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ADAMTSL2Q86TH1 951 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 TRABD2AQ86V40 505 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 AMIGO1Q86WK6 493 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 CNPY4Q8N129 248 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 OR4E2Q8NGC2 313 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 OR2L8Q8NGY9 312 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ACMSDQ8TDX5 336 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ADAMTS14Q8WXS8 1223 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 ABCG4Q9H172 646 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 RDH14Q9HBH5 336 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SPHK1Q9NYA1 384 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 OR6C2Q9NZP2 312 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 SPATA7Q9P0W8 599 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 TDRKHQ9Y2W6 561 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
MTHFD1-204ENST00000553405 KNTC1P50748 2209 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 TARM1B6A8C7 271 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 E7ENX8 843 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 AGPSO00116 658 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 DUX1O43812 170 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 CHRM5P08912 532 aaPredicted RBP14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 PYGBP11216 843 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 CDK4P11802 303 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 COL6A2P12110 1019 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 TFEBP19484 476 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 LSSP48449 732 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 CDKL1Q00532 357 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 TAP2Q03519 686 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 SLC18A2Q05940 514 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 FASTKQ14296 549 aaKnown RBP14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 KRT33BQ14525 404 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 ARHGAP19Q14CB8 494 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 PLCL1Q15111 1095 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 AMZ1Q400G9 498 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 TAF1BQ53T94 588 aaPredicted RBP14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 TECRLQ5HYJ1 363 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 USP53Q70EK8 1073 aa14.37□□□□□ -0.11
MTHFD1-204ENST00000553405 B3GNT8Q7Z7M8 397 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms