RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 CYP2U1Q7Z449 544 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 TRMT11Q7Z4G4 463 aaKnown RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 ZNF513Q8N8E2 541 aaPredicted RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 CLHC1Q8NHS4 586 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 N4BP2L2Q92802 583 aaPredicted RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 GLMNQ92990 594 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 ANKRD27Q96NW4 1050 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 HEBP1Q9NRV9 189 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 SLAMF8Q9P0V8 285 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 EGFL7Q9UHF1 273 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 LEF1Q9UJU2 399 aaPredicted RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 CNOT6Q9ULM6 557 aaKnown RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 PSMD13Q9UNM6 376 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 EIF3LQ9Y262 564 aaKnown RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 PRKAB1Q9Y478 270 aa8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 SPTBN5Q9NRC6 3674 aaKnown RBP8.86□□□□□ -0.99
RAB3IP-218ENST00000553099 NUP214P35658 2090 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 CKAP5Q14008 2032 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ASPDHA6ND91 283 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 RSL1D1O76021 490 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PAPLNO95428 1278 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PCCBP05166 539 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 LAMP2P13473 410 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC6A2P23975 617 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 TIE1P35590 1138 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 GRIA2P42262 883 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 GNPDA1P46926 289 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC6A12P48065 614 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 DGKQP52824 942 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 GRIK2Q13002 908 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 CHIT1Q13231 466 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 NAE1Q13564 534 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 DDX39BQ13838 428 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ITPRIPL2Q3MIP1 535 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 RABL3Q5HYI8 236 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 C8orf82Q6P1X6 216 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC15A3Q8IY34 581 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PQLC1Q8N2U9 271 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 LIX1Q8N485 282 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PLA2G15Q8NCC3 412 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 LRGUKQ96M69 825 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 HOPXQ9BPY8 73 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 TRMT61BQ9BVS5 477 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC29A3Q9BZD2 475 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ATXN10Q9UBB4 475 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SNX6Q9UNH7 406 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 STON1Q9Y6Q2 735 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PRUNE2Q8WUY3 3088 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PCM1Q15154 2024 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC5A10A0PJK1 596 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PSIP1O75475 530 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 EEDO75530 441 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC16A8O95907 504 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PFN3P60673 137 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 IRF8Q02556 426 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 MAD2L1Q13257 205 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 C6orf10Q5SRN2 563 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 CACHD1Q5VU97 1274 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 FAM46CQ5VWP2 391 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PRMT9Q6P2P2 845 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 AGTRAPQ6RW13 159 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ADGRG6Q86SQ4 1221 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 DHFR2Q86XF0 187 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 RNF175Q8N4F7 328 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 TMEM74Q96NL1 305 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ACPTQ9BZG2 426 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 ACTL8Q9H568 366 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 PIF1Q9H611 641 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC52A3Q9NQ40 469 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 INTS7Q9NVH2 962 aaKnown RBP8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 CD300AQ9UGN4 299 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 TMEM98Q9Y2Y6 226 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 CCL27Q9Y4X3 112 aa8.85□□□□□ -0.99
RAB3IP-218ENST00000553099 GOLGA4Q13439 2230 aaKnown RBP8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 E7EQ34 232 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 GRIA3P42263 894 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 CLNS1AP54105 237 aaKnown RBP8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 IRX1P78414 480 aaPredicted RBP8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 STARD3Q14849 445 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 XKR6Q5GH73 641 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 COQ5Q5HYK3 327 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 PIP5KL1Q5T9C9 394 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 ZFP1Q6P2D0 407 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 THOC6Q86W42 341 aaKnown RBP8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 SYTL1Q8IYJ3 562 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 SLC22A15Q8IZD6 547 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 CHCHD4Q8N4Q1 142 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 MINDY1Q8N5J2 469 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 TSPEARQ8WU66 669 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 USP7Q93009 1102 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 FBXL8Q96CD0 374 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 ZBTB18Q99592 522 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 ECSITQ9BQ95 431 aa8.84□□□□□ -0.99
RAB3IP-218ENST00000553099 GPATCH1Q9BRR8 931 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms