RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CPNE1Q99829 537 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 DDA1Q9BW61 102 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 PITPNM3Q9BZ71 974 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 RHOJQ9H4E5 214 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 LRRC4CQ9HCJ2 640 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 SMYD2Q9NRG4 433 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ACSL6Q9UKU0 697 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 RUVBL2Q9Y230 463 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TDRKHQ9Y2W6 561 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 NFS1Q9Y697 457 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 SPTBP11277 2137 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 PIPSLA2A3N6 862 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 EFCAB7A8K855 629 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 A8MU76 341 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 ARHGEF33A8MVX0 844 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 ESPNB1AK53 854 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 MYO1CO00159 1063 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 BTN3A3O00478 584 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 RASGRF2O14827 1237 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 NVLO15381 856 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 KIF1CO43896 1103 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 C1orf105O95561 183 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 CATP04040 527 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 CHRM5P08912 532 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 POLR2CP19387 275 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 ETV5P41161 510 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 RGS4P49798 205 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 KPNA2P52292 529 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 PCBP4P57723 403 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 SP140Q13342 867 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 GRB7Q14451 532 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 HECTD2Q5U5R9 776 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 SPESP1Q6UW49 350 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 RASGRP3Q8IV61 690 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 CPNE9Q8IYJ1 553 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 RAB42Q8N4Z0 105 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 FBXO15Q8NCQ5 510 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 LRRN4CLQ8ND94 238 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 OR2L8Q8NGY9 312 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 IFT81Q8WYA0 676 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 RAD51AP1Q96B01 352 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 VPS39Q96JC1 886 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 TAAR9Q96RI9 348 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 MAP3K3Q99759 626 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 XKR8Q9H6D3 395 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 C1GALT1Q9NS00 363 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 ACTR10Q9NZ32 417 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 SPATA7Q9P0W8 599 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 TXNDC16Q9P2K2 825 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 PLAGL1Q9UM63 463 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 BTRCQ9Y297 605 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 PCDHGA3Q9Y5H0 932 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 FER1L5A0AVI2 2057 aa11.35□□□□□ -0.59
TRAFD1-209ENST00000552896 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 PTPRQQ9UMZ3 2332 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 IGHV5-51A0A0C4DH38 117 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM95CA0A1B0GW59 222 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 CXorf49A8MYA2 514 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 ZBTB11O95625 1053 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 RHOXF2BP0C7M4 288 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 ERGP11308 486 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 FGF3P11487 239 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 CCL4P13236 92 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 UGT2B7P16662 529 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 ZNF37AP17032 561 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 NELFEP18615 380 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 MCM3P25205 808 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 CD82P27701 267 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 PHBP35232 272 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 GP5P40197 560 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 MAPK10P53779 464 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 MC2RQ01718 297 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 KIR2DS3Q14952 304 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 KBTBD12Q3ZCT8 623 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 PIWIL4Q7Z3Z4 852 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 HMGCLL1Q8TB92 370 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 FBF1Q8TES7 1133 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 ASB11Q8WXH4 323 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 FGF11Q92914 225 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 ELMO2Q96JJ3 720 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 TEFMQ96QE5 360 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 RBBP8Q99708 897 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 NRTNQ99748 197 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 OLFM1Q99784 485 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 RHOXF2Q9BQY4 288 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 CDC42EP4Q9H3Q1 356 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 FBXO8Q9NRD0 319 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 OCIAD1Q9NX40 245 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 NINJ2Q9NZG7 142 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 SLC39A10Q9ULF5 831 aa11.34□□□□□ -0.59
TRAFD1-209ENST00000552896 VWA7Q9Y334 891 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms