RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RAB43Q86YS6 212 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ADGRF3Q8IZF5 1079 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 C19orf60Q96EN9 201 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 FERD3LQ96RJ6 166 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 COPS8Q99627 209 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 BARD1Q99728 777 aaKnown RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 C17orf62Q9BQA9 187 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 COG4Q9H9E3 785 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CASS4Q9NQ75 786 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 SMARCAL1Q9NZC9 954 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CRLS1Q9UJA2 301 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 PADI2Q9Y2J8 665 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.58
CKAP4-202ENST00000552828 TRBV5-4A0A0C4DH59 114 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 C9J4A7 227 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 CFAP99D6REC4 459 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 PHF2O75151 1096 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 SUN1O94901 812 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 GAS8O95995 478 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 LDLRP01130 860 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 APRTP07741 180 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 GSTM1P09488 218 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 AGXTP21549 392 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 FNTAP49354 379 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 SOX8P57073 446 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 GSTM4Q03013 218 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
CKAP4-202ENST00000552828 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
CKAP4-202ENST00000552828 MAMDC2Q7Z304 686 aaPredicted RBP11.45□□□□□ -0.58
CKAP4-202ENST00000552828 MRGPREQ86SM8 312 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 AMIGO1Q86WK6 493 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 CREG2Q8IUH2 290 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 IQCKQ8N0W5 287 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 OR52E1Q8NGJ3 308 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 OR13C4Q8NGS5 318 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 PRR7Q8TB68 274 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 GRK7Q8WTQ7 553 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 SNRNP40Q96DI7 357 aaKnown RBP11.45□□□□□ -0.58
CKAP4-202ENST00000552828 TCTN2Q96GX1 697 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 SGSM3Q96HU1 749 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 CAPZA3Q96KX2 299 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 NRTNQ99748 197 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 LUZP4Q9P127 313 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 RNF14Q9UBS8 474 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 ERRFI1Q9UJM3 462 aaPredicted RBP11.45□□□□□ -0.58
CKAP4-202ENST00000552828 B3GNT3Q9Y2A9 372 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 AP1M2Q9Y6Q5 423 aa11.45□□□□□ -0.58
CKAP4-202ENST00000552828 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 A1L4Q6 167 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 H7C0S8 307 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 IFRD1O00458 451 aaPredicted RBP11.44□□□□□ -0.58
CKAP4-202ENST00000552828 LDB2O43679 373 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 KLHL41O60662 606 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 CLDN1O95832 211 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 IGHEP01854 428 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 KRT14P02533 472 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 CD63P08962 238 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 PVRP15151 417 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 TPH1P17752 444 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 ITGALP20701 1170 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 PDHA2P29803 388 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 GABRA4P48169 554 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 BASP1P80723 227 aaKnown RBP11.44□□□□□ -0.58
CKAP4-202ENST00000552828 CDH17Q12864 832 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 MYBPC3Q14896 1274 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
CKAP4-202ENST00000552828 DCAF10Q5QP82 559 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 RHBDD2Q6NTF9 364 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 SPESP1Q6UW49 350 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 DNAAF3Q8N9W5 541 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 PHC3Q8NDX5 983 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 TFGQ92734 400 aaPredicted RBP11.44□□□□□ -0.58
CKAP4-202ENST00000552828 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.44□□□□□ -0.584e-11■■■■■ 51
CKAP4-202ENST00000552828 FER1L6-AS2Q96M78 137 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 FAM96AQ9H5X1 160 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 VPS37BQ9H9H4 285 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 FAM60AQ9NP50 221 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 EIF2B3Q9NR50 452 aaKnown RBP11.44□□□□□ -0.58
CKAP4-202ENST00000552828 ACTR10Q9NZ32 417 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 SEC16AO15027 2179 aa11.44□□□□□ -0.58
CKAP4-202ENST00000552828 FANCGO15287 622 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 HCRTR1O43613 425 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ALPPP05187 535 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 CBSLP0DN79 551 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ACRV1P26436 265 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 OTX2P32243 289 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 CBSP35520 551 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 DCDP81605 110 aaKnown RBP11.43□□□□□ -0.58
CKAP4-202ENST00000552828 GPS1Q13098 491 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 RAPSNQ13702 412 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 NR6A1Q15406 480 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms