RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RGS4P49798 205 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 SH3BP2P78314 561 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 ACY1Q03154 408 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 CBLBQ13191 982 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 KYNUQ16719 465 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 LRRC8EQ6NSJ5 796 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 NEK10Q6ZWH5 1172 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 ZFAND4Q86XD8 727 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 NOA1Q8NC60 698 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 CD200R1Q8TD46 325 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 HNRNPLLQ8WVV9 542 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 PMEPA1Q969W9 287 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 SLC41A2Q96JW4 573 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 NRTNQ99748 197 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 PDE7BQ9NP56 450 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 FAM114A2Q9NRY5 505 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 TXNDC16Q9P2K2 825 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 MTRF1LQ9UGC7 380 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 CIDEBQ9UHD4 219 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 ISM1B1AKI9 464 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 C1orf105O95561 183 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 AHSGP02765 367 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 CBSLP0DN79 551 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 MAP4P27816 1152 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 CBSP35520 551 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 SKIV2L2P42285 1042 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 ATP1A2P50993 1020 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 TUBB3Q13509 450 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 KIR2DS3Q14952 304 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 TRADDQ15628 312 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 GLE1Q53GS7 698 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 RBM20Q5T481 1227 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 SPESP1Q6UW49 350 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 ZDHHC24Q6UX98 284 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 CEP128Q6ZU80 1094 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC26A11Q86WA9 606 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 RASGRP3Q8IV61 690 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 CPNE9Q8IYJ1 553 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 GIMAP7Q8NHV1 300 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 PPM1MQ96MI6 270 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC30A3Q99726 388 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 FANCEQ9HB96 536 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 APMAPQ9HDC9 416 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 MOCS1Q9NZB8 636 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 LNPEPQ9UIQ6 1025 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 RARRES3Q9UL19 164 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 MED16Q9Y2X0 877 aa17.89■□□□□ 0.45
PRPF40B-216ENST00000552301 CFAP47Q6ZTR5 3102 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC9B1P1A6NJY1 282 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 EIF3FO00303 357 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 RASGRF2O14827 1237 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 MATN4O95460 622 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 GSTA2P09210 222 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 EBLN1P0CF75 366 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 MPC1LP0DKB6 136 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 UGT2B7P16662 529 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 CD9P21926 228 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 MCM3P25205 808 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 ITPKBP27987 946 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 GABRB3P28472 473 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 SSTR1P30872 391 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 MAGEA4P43358 317 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 PDAP1Q13442 181 aaKnown RBP17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 IL11RAQ14626 422 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 KCNAB1Q14722 419 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 FAM45BPQ6NSW5 357 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 FBXO38Q6PIJ6 1188 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 STRA8Q7Z7C7 330 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 TAX1BP1Q86VP1 789 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 PPP1R3BQ86XI6 285 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 OR2L8Q8NGY9 312 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 FAM45AQ8TCE6 357 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC22A18Q96BI1 424 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 ELMO2Q96JJ3 720 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 IL17FQ96PD4 163 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 PITPNM3Q9BZ71 974 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 FAM129AQ9BZQ8 928 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 SPATA7Q9P0W8 599 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 BTRCQ9Y297 605 aa17.88■□□□□ 0.45
PRPF40B-216ENST00000552301 TPBGLP0DKB5 382 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 UCNP55089 124 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 TLE3Q04726 772 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 ILF2Q12905 390 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 CLN3Q13286 438 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 HECTD2Q5U5R9 776 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 C19orf48Q6RUI8 117 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 C3orf62Q6ZUJ4 267 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 TRIM73Q86UV7 250 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 MYO1HQ8N1T3 1032 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 D2HGDHQ8N465 521 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 SEC14L1Q92503 715 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 KLHL25Q9H0H3 589 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 FGF21Q9NSA1 209 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 SPHK1Q9NYA1 384 aa17.87■□□□□ 0.45
PRPF40B-216ENST00000552301 SDK2Q58EX2 2172 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 PKD1L2Q7Z442 2459 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 A0A0J9YY10 115 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 PABPN1LA6NDY0 278 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 ARHGEF33A8MVX0 844 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms