RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 AP2A2O94973 939 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 ZRANB2O95218 330 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 ALAS2P22557 587 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 ACRV1P26436 265 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 RBL1P28749 1068 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 ATP5OP48047 213 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 TRIM14Q14142 442 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 TLR1Q15399 786 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 FCRL6Q6DN72 434 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 FAM180AQ6UWF9 173 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 IGFL2Q6UWQ7 119 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 TAS2R42Q7RTR8 314 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 SERPINA9Q86WD7 417 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 RCOR2Q8IZ40 523 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 OR5AR1Q8NGP9 310 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 WDR54Q9H977 334 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 MRM3Q9HC36 420 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 SLC6A20Q9NP91 592 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 SPTLC3Q9NUV7 552 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 TDRKHQ9Y2W6 561 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 CSAG2Q9Y5P2 127 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 SNRNP200O75643 2136 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 C2CD3Q4AC94 2353 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 PRSS44E7EML9 344 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 APOC4-APOC2K7ER74 178 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 QSOX1O00391 747 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 ZG16O60844 167 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 APOC2P02655 101 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 TPM1P09493 284 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 PRF1P14222 555 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 ARSFP54793 590 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 FOXL2P58012 376 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 OLIG2Q13516 323 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 KIR2DS3Q14952 304 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 TCEAL1Q15170 157 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 SLC5A12Q1EHB4 618 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 SYTL3Q4VX76 610 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 CCDC181Q5TID7 509 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 SP5Q6BEB4 398 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 TMTC1Q8IUR5 882 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 MCEMP1Q8IX19 187 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 TBC1D21Q8IYX1 336 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 DNAJC22Q8N4W6 341 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 CLDN19Q8N6F1 224 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 UNKQ9C0B0 810 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 LHPPQ9H008 270 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 NHEJ1Q9H9Q4 299 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 SPHK1Q9NYA1 384 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 INTUQ9ULD6 942 aa13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHMP1A-210ENST00000551981 TRBV5-4A0A0C4DH59 114 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 A0A1B0GX78 115 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 ISM1B1AKI9 464 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 CCL22O00626 93 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 ALBP02768 609 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 FTH1P02794 183 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 CTSBP07858 339 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 PSMB4P28070 264 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 TUBB8Q3ZCM7 444 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 BBS12Q6ZW61 710 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 OVCH1Q7RTY7 1134 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 CDKL3Q8IVW4 592 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 BCORP1Q8N888 145 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 FLVCR1-AS1Q8TAF5 88 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 ELMO1Q92556 727 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 TBL1YQ9BQ87 522 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 SLC22A11Q9NSA0 550 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 OLAHQ9NV23 265 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 EURLQ9NYK6 297 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 COPG2Q9UBF2 871 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 ALG6Q9Y672 507 aa13.64□□□□□ -0.23
CHMP1A-210ENST00000551981 TACC2O95359 2948 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 PDZD2O15018 2839 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 H7C0S8 307 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 SOCS6O14544 535 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ALOX12BO75342 701 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 AP2A1O95782 977 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 STSP08842 583 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 POU3F2P20265 443 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ITGAXP20702 1163 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 NSG1P42857 185 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 CDKN1CP49918 316 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 PLOD1Q02809 727 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 CACNG1Q06432 222 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 RBBP7Q16576 425 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ANKRD20A2Q5SQ80 823 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ANKRD20A1Q5TYW2 823 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ANKRD20A3Q5VUR7 823 aa13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 YOD1Q5VVQ6 348 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-210ENST00000551981 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms