RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 STK40Q8N2I9 435 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ZCCHC9Q8N567 271 aaKnown RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 KDM1BQ8NB78 822 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 OR2A12Q8NGT7 310 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 RNF139Q8WU17 664 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 RXFP2Q8WXD0 754 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 PIGKQ92643 395 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 BIRC7Q96CA5 298 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CTHRC1Q96CG8 243 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 C18orf8Q96DM3 657 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGEF26Q96DR7 871 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 TKTL2Q9H0I9 626 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CHST8Q9H2A9 424 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 PABPC3Q9H361 631 aaKnown RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 PRDM16Q9HAZ2 1276 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ANO10Q9NW15 660 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 GPATCH2LQ9NWQ4 482 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ASIC5Q9NY37 505 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 COX16Q9P0S2 106 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 LHX3Q9UBR4 397 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CA5BQ9Y2D0 317 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 U3KQA8 63 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 GOLGA6CA6NDK9 693 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA6BA6NDN3 693 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 RAB27BO00194 218 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 NPC1O15118 1278 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 RAD51BO15315 384 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 PLRG1O43660 514 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 RTN2O75298 545 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 PIAS2O75928 621 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 FGFR1OPO95684 399 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MBD3O95983 291 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SRPRAP08240 638 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SERPINF2P08697 491 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 CHRM5P08912 532 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA6DP0CG33 693 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 HGFP14210 728 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 PEX2P28328 305 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 CCR1P32246 355 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 HOXD12P35452 270 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ARSEP51690 589 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GALCP54803 685 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 CLDN6P56747 220 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ARHGAP8P85298 464 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SHC2P98077 582 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ECT2LQ008S8 904 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TIAL1Q01085 375 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SLC25A11Q02978 314 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA8FQ08AF8 430 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA8DPQ0D2H9 430 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 CETN1Q12798 172 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 CNTN1Q12860 1018 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 NME3Q13232 169 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MAMLD1Q13495 774 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GALEQ14376 348 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ELF2Q15723 593 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GFOD2Q3B7J2 385 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ZSCAN23Q3MJ62 389 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 EFHC1Q5JVL4 640 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 BRMS1LQ5PSV4 323 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SFMBT2Q5VUG0 894 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 C11orf87Q6NUJ2 197 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 PPP4R4Q6NUP7 873 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 C22orf39Q6P5X5 142 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SLC2A7Q6PXP3 512 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 PTCHD4Q6ZW05 846 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 STRADAQ7RTN6 431 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TRMT11Q7Z4G4 463 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TFAP2DQ7Z6R9 452 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF677Q86XU0 584 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MARCH9Q86YJ5 346 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ZDHHC17Q8IUH5 632 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MMAAQ8IVH4 418 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 FAM114A1Q8IWE2 563 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GALNT16Q8N428 558 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MINDY1Q8N5J2 469 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 DCAF4L2Q8NA75 395 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TMEM35BQ8NCS4 154 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 DEFB124Q8NES8 71 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
SCAF11-214ENST00000550893 NTAN1Q96AB6 310 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 SIPA1Q96FS4 1042 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 FAM81BQ96LP2 452 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 AGPAT1Q99943 283 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 NEUROG2Q9H2A3 272 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 LRRC19Q9H756 370 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TM9SF3Q9HD45 589 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 ETNK2Q9NVF9 386 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 TMEM248Q9NWD8 314 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA6AQ9NYA3 693 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 AIPL1Q9NZN9 384 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 MID2Q9UJV3 735 aa4.9□□□□□ -1.63
SCAF11-214ENST00000550893 KNTC1P50748 2209 aa4.89□□□□□ -1.63
SCAF11-214ENST00000550893 A0A087X0T9 212 aa4.89□□□□□ -1.63
SCAF11-214ENST00000550893 EDDM13A0A1B0GTR0 161 aa4.89□□□□□ -1.63
SCAF11-214ENST00000550893 SPAARA0A1B0GVQ0 90 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms