RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 TAAR9Q96RI9 348 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 CD180Q99467 661 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 FMO2Q99518 471 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 OLFM1Q99784 485 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 NSMCE4AQ9NXX6 385 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 OR6C2Q9NZP2 312 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 FOXJ2Q9P0K8 574 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
TROAP-213ENST00000550709 FAM95CA0A1B0GW59 222 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 B4E171 279 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 C9orf172C9J069 976 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 RASGRF2O14827 1237 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ZNF500O60304 480 aaPredicted RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 SYF2O95926 243 aaKnown RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 CBSLP0DN79 551 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ENO3P13929 434 aaPredicted RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 UGT2B7P16662 529 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 FDXRP22570 491 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ECHS1P30084 290 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 STX2P32856 288 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 CBSP35520 551 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 CCNFP41002 786 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 TSPAN7P41732 249 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 RGS4P49798 205 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 RAB28P51157 221 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 MC2RQ01718 297 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 EFTUD2Q15029 972 aaKnown RBP eCLIP13.3□□□□□ -0.28
TROAP-213ENST00000550709 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 TEX35Q5T0J7 233 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 UBAP2Q5T6F2 1119 aaKnown RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 TMEM164Q5U3C3 297 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 FAM45BPQ6NSW5 357 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 IGF2-ASQ6U949 168 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 SPESP1Q6UW49 350 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 CYHR1Q6ZMK1 362 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ZFAND4Q86XD8 727 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 FAM20CQ8IXL6 584 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 LINC01555Q8NAE3 123 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 FAM45AQ8TCE6 357 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 MAGEC3Q8TD91 643 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 OR6C1Q96RD1 312 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 FAM129AQ9BZQ8 928 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 RHOJQ9H4E5 214 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 APMAPQ9HDC9 416 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 SOHLH2Q9NX45 425 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 NINJ2Q9NZG7 142 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
TROAP-213ENST00000550709 B3GALT1Q9Y5Z6 326 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 DMXL2Q8TDJ6 3036 aa13.3□□□□□ -0.28
TROAP-213ENST00000550709 ACACAQ13085 2346 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 MATN2O00339 956 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 NVLO15381 856 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 PSIP1O75475 530 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 FAM155BO75949 473 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 ACSL3O95573 720 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 ZBTB11O95625 1053 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 EBLN1P0CF75 366 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 MPC1LP0DKB6 136 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 FOLR1P15328 257 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 CD9P21926 228 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 MAP4P27816 1152 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 PEBP1P30086 187 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 PCBP4P57723 403 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 TAS2R39P59534 338 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 HSD11B2P80365 405 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 ZNF460Q14592 562 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 KIF26BQ2KJY2 2108 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 DCAF12Q5T6F0 453 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 UBE2R2Q712K3 238 aaPredicted RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 CYS1Q717R9 158 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 CLEC14AQ86T13 490 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 RAB42Q8N4Z0 105 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 OR2L8Q8NGY9 312 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 SNIP1Q8TAD8 396 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 ASB11Q8WXH4 323 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 VPS39Q96JC1 886 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 PKP4Q99569 1192 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 CPNE1Q99829 537 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 MENTQ9BUN1 341 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 PCDHGA7Q9Y5G6 932 aa13.29□□□□□ -0.28
TROAP-213ENST00000550709 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
TROAP-213ENST00000550709 PIKFYVEQ9Y2I7 2098 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms