RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PEBP1P30086 187 aaKnown RBP12.65□□□□□ -0.38
RAB5C-206ENST00000550406 PKLRP30613 574 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 SLC26A3P40879 764 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 CCNFP41002 786 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 MAPK9P45984 424 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 E2F1Q01094 437 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 PUM1Q14671 1186 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAB5C-206ENST00000550406 MBOAT1Q6ZNC8 495 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 TAOK1Q7L7X3 1001 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 ISCA2Q86U28 154 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 LRRC56Q8IYG6 542 aaPredicted RBP12.65□□□□□ -0.38
RAB5C-206ENST00000550406 LINC01555Q8NAE3 123 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 OR9A1PQ8NGU1 263 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 LCN9Q8WX39 176 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 VPS11Q9H270 941 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 RDH14Q9HBH5 336 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 TLK1Q9UKI8 766 aa12.65□□□□□ -0.38
RAB5C-206ENST00000550406 NOVA2Q9UNW9 492 aaKnown RBP12.65□□□□□ -0.38
RAB5C-206ENST00000550406 OR6C74A6NCV1 312 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 OR5K3A6NET4 321 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 GOLGA8RI6L899 631 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 BTN3A1O00481 513 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 PRICKLE3O43900 615 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 RPN2P04844 631 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 ERGP11308 486 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 POLR2CP19387 275 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 CAPZBP47756 277 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 PDX1P52945 283 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 GPLD1P80108 840 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 SP140Q13342 867 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 FASTKQ14296 549 aaKnown RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 CASP8Q14790 479 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 PLCL1Q15111 1095 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 CYP2A13Q16696 494 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 LRIG3Q6UXM1 1119 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 TBC1D1Q86TI0 1168 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 AMIGO1Q86WK6 493 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 TMEM151AQ8N4L1 468 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 C2orf73Q8N5S3 287 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 OR10G6Q8NH81 332 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 NCSTNQ92542 709 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 KIAA1191Q96A73 305 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 ABCG4Q9H172 646 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 SRMSQ9H3Y6 488 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 HRASLS2Q9NWW9 162 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 SPHK1Q9NYA1 384 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 APOBEC2Q9Y235 224 aaKnown RBP12.64□□□□□ -0.39
RAB5C-206ENST00000550406 HEATR5BQ9P2D3 2071 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 SPEGQ15772 3267 aa12.64□□□□□ -0.39
RAB5C-206ENST00000550406 DCHS1Q96JQ0 3298 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 A0A1W2PPV9 198 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 CPNE6O95741 557 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 SLC16A8O95907 504 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 MT-ND3P03897 115 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 UQCRHP07919 91 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 CHRM5P08912 532 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 SBK3P0C264 359 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 PYGBP11216 843 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 AMD1P17707 334 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 TFEBP19484 476 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 MPSTP25325 297 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 IMPA1P29218 277 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 SHMT2P34897 504 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ID4P47928 161 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 GLRBP48167 497 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 LSSP48449 732 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 RAB28P51157 221 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 GFERP55789 205 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ATP6V0D1P61421 351 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 TNFAIP8L3Q5GJ75 292 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 N4BP2L1Q5TBK1 243 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 TTC23LQ6PF05 361 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 WDR74Q6RFH5 385 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 B3GNT8Q7Z7M8 397 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 MARCH9Q86YJ5 346 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 RIBC1Q8N443 379 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 OR2L8Q8NGY9 312 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ADAMTS14Q8WXS8 1223 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 CCDC138Q96M89 665 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 PPM1MQ96MI6 270 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 GFM1Q96RP9 751 aaKnown RBP12.63□□□□□ -0.39
RAB5C-206ENST00000550406 ATOH8Q96SQ7 321 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 SEMA6CQ9H3T2 930 aa12.63□□□□□ -0.39
RAB5C-206ENST00000550406 EPB41L1Q9H4G0 881 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms