RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.13□□□□□ -0.47
LETMD1-222ENST00000550274 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
LETMD1-222ENST00000550274 COPG1Q9Y678 874 aaKnown RBP12.13□□□□□ -0.47
LETMD1-222ENST00000550274 PRSS21Q9Y6M0 314 aa12.13□□□□□ -0.47
LETMD1-222ENST00000550274 TACC2O95359 2948 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 DCHS2Q6V1P9 2916 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 A0A0J9YY10 115 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 ALOX12BO75342 701 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 TPH1P17752 444 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 SOX8P57073 446 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 BRD3Q15059 726 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 NKAIN1Q4KMZ8 207 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 KCTD11Q693B1 232 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 DARS2Q6PI48 645 aaKnown RBP12.12□□□□□ -0.47
LETMD1-222ENST00000550274 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 Q6ZS92 163 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 PTERQ96BW5 349 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 AP1M1Q9BXS5 423 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 NLE1Q9NVX2 485 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-222ENST00000550274 PLAGL1Q9UM63 463 aa12.12□□□□□ -0.47
LETMD1-222ENST00000550274 TDRKHQ9Y2W6 561 aaKnown RBP12.12□□□□□ -0.47
LETMD1-222ENST00000550274 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 AGPSO00116 658 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 LIN7AO14910 233 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 STK10O94804 968 aaKnown RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 IPO13O94829 963 aaKnown RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 IGHEP01854 428 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 GSTM1P09488 218 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 ITGAXP20702 1163 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 GCGRP47871 477 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 GLRBP48167 497 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 COPS2P61201 443 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 GSTM4Q03013 218 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CACNG1Q06432 222 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 ELOAQ14241 798 aaKnown RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 POU6F1Q14863 301 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 HIF1AQ16665 826 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CYP2A13Q16696 494 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 TLDC1Q6P9B6 456 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 TICAM1Q8IUC6 712 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CNGA4Q8IV77 575 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 TBC1D21Q8IYX1 336 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 ZADH2Q8N4Q0 377 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 ELMO1Q92556 727 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 SLC6A20Q9NP91 592 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 TXLNGQ9NUQ3 528 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 PIH1D1Q9NWS0 290 aaKnown RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 IRAK4Q9NWZ3 460 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 SMARCAL1Q9NZC9 954 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 FEZ2Q9UHY8 353 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-222ENST00000550274 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 KLHL20Q9Y2M5 609 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 FBN2P35556 2912 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 PDZD2O15018 2839 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
LETMD1-222ENST00000550274 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 ISM1B1AKI9 464 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 AKR1B15C9JRZ8 316 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-222ENST00000550274 AP2A2O94973 939 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 CD63P08962 238 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 MAGP20916 626 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 ITGA3P26006 1051 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 CTNNA2P26232 953 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 PTPN7P35236 360 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 NSG1P42857 185 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 SLC5A12Q1EHB4 618 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 LMNTD1Q8N9Z9 388 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 TM9SF4Q92544 642 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-222ENST00000550274 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 ATP13A2Q9NQ11 1180 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 EURLQ9NYK6 297 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 OR6C2Q9NZP2 312 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 POLG2Q9UHN1 485 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 FBXL4Q9UKA2 621 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 NOVA2Q9UNW9 492 aaKnown RBP12.1□□□□□ -0.47
LETMD1-222ENST00000550274 PLCL2Q9UPR0 1127 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 EFR3BQ9Y2G0 817 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 PCDHA3Q9Y5H8 950 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 PCDHA13Q9Y5I0 950 aa12.1□□□□□ -0.47
LETMD1-222ENST00000550274 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
LETMD1-222ENST00000550274 E2F3O00716 465 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms