RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ITGALP20701 1170 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 ARNTP27540 789 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 XIAPP98170 497 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 CRYMQ14894 314 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 BRD3Q15059 726 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 GPR19Q15760 415 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 SPANXN3Q5MJ09 141 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 METRNLQ641Q3 311 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 KIAA0930Q6ICG6 404 aaPredicted RBP13.04□□□□□ -0.32
NUP188-211ENST00000550219 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
NUP188-211ENST00000550219 CES3Q6UWW8 571 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 UNC5AQ6ZN44 842 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 TMEM126BQ8IUX1 230 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 OR2L2Q8NH16 312 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 CAVIN3Q969G5 261 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 CD180Q99467 661 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 LRRC4CQ9HCJ2 640 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 MOCS1Q9NZB8 636 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 GSAPA4D1B5 854 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 CCDC151A5D8V7 595 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 K7EM74 188 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 CPNE3O75131 537 aaKnown RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 SCRG1O75711 98 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 DNAJB5O75953 348 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 POLR2CP19387 275 aaPredicted RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 GPX6P59796 221 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 HSD11B2P80365 405 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 PRKAA1Q13131 559 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 BCL7AQ4VC05 210 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 ZNF449Q6P9G9 518 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 TRMT10CQ7L0Y3 403 aaKnown RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 KMT5CQ86Y97 462 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 PALM2Q8IXS6 379 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 CFAP206Q8IYR0 622 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUP188-211ENST00000550219 HM13Q8TCT9 377 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 MR1Q95460 341 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 HDAC10Q969S8 669 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 COL26A1Q96A83 441 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 ZNF669Q96BR6 464 aaPredicted RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 ULK4Q96C45 1275 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 FUT8Q9BYC5 575 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 CDC42EP4Q9H3Q1 356 aaKnown RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 KIR3DX1Q9H7L2 352 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 AKIRIN1Q9H9L7 192 aaPredicted RBP13.03□□□□□ -0.32
NUP188-211ENST00000550219 SEMA5BQ9P283 1151 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
NUP188-211ENST00000550219 CCDC78A2IDD5 438 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 AGAP14A8MT82 685 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 C21orf140B9A014 251 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CFAP99D6REC4 459 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 SGTAO43765 313 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 ZBTB11O95625 1053 aaPredicted RBP13.02□□□□□ -0.33
NUP188-211ENST00000550219 C1QAP02745 245 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 PAMP19021 973 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CDH3P22223 829 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 NDUFS1P28331 727 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 MC4RP32245 332 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 PRLHRP49683 370 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 PMS2P54278 862 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 FOXK1P85037 733 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 KLRB1Q12918 225 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CHAF1BQ13112 559 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 KYNUQ16719 465 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 ZRANB3Q5FWF4 1079 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CPZQ66K79 652 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 NXPE1Q8N323 547 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 TEX19Q8NA77 164 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 OR4E2Q8NGC2 313 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 FERD3LQ96RJ6 166 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 COPS8Q99627 209 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 EPB41L4BQ9H329 900 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 PLAAQ9Y263 795 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 PCDHGA6Q9Y5G7 932 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 COLEC10Q9Y6Z7 277 aa13.02□□□□□ -0.33
NUP188-211ENST00000550219 FLNBO75369 2602 aaKnown RBP13.01□□□□□ -0.33
NUP188-211ENST00000550219 VAPBO95292 243 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 GOT2P00505 430 aaKnown RBP13.01□□□□□ -0.33
NUP188-211ENST00000550219 ABHD2P08910 425 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 PRSS56P0CW18 603 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 SSTR1P30872 391 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 FOXN2P32314 431 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 RPS15P62841 145 aaKnown RBP13.01□□□□□ -0.33
NUP188-211ENST00000550219 GPS2Q13227 327 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 IL10RAQ13651 578 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 LONRF1Q17RB8 773 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
NUP188-211ENST00000550219 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
NUP188-211ENST00000550219 TRMT10BQ6PF06 316 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms