RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 MSS51Q4VC12 460 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 ZNF789Q5FWF6 425 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 SPANXN3Q5MJ09 141 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 PWWP2BQ6NUJ5 590 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 CNSTQ6PJW8 725 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 TRIM73Q86UV7 250 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 TMEM126BQ8IUX1 230 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 LSM14AQ8ND56 463 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 RNF31Q96EP0 1072 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 TRAPPC9Q96Q05 1148 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 OR2A14Q96R47 310 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 KRT12Q99456 494 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 TWSG1Q9GZX9 223 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 SYTL2Q9HCH5 934 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 FBXO6Q9NRD1 293 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 LATS2Q9NRM7 1088 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 SPHK1Q9NYA1 384 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 FBXO5Q9UKT4 447 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 A0A0J9YY10 115 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 LOC101059948A0A1B0GTJ6 334 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 ZNF891A8MT65 544 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 NDC80O14777 642 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 CPNE3O75131 537 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 CCNFP41002 786 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 TTLL9Q3SXZ7 439 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 TAF1BQ53T94 588 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 HSP90AA5PQ58FG0 334 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 HIBCHQ6NVY1 386 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 UNC5BQ8IZJ1 945 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 RAB42Q8N4Z0 105 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 C19orf47Q8N9M1 422 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 TTC9Q92623 222 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 KCNJ9Q92806 393 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 LRRC39Q96DD0 335 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC45A3Q96JT2 553 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 MENTQ9BUN1 341 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 TRIM31Q9BZY9 425 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 KLHL25Q9H0H3 589 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 TSR3Q9UJK0 312 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 RUVBL2Q9Y230 463 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 COMMD10Q9Y6G5 202 aa16.66■□□□□ 0.26
CHMP1A-208ENST00000550102 PCM1Q15154 2024 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 EFCAB8A8MWE9 144 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 ISM1B1AKI9 464 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 TMEM150CB9EJG8 249 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 TK2O00142 265 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 RASGRF2O14827 1237 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SCRG1O75711 98 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 C1orf105O95561 183 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 ITGB2P05107 769 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 F7P08709 466 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 CD9P21926 228 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 BDKRB1P46663 353 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 ITGA8P53708 1063 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 ARL4CP56559 192 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 MPP1Q00013 466 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 GRB7Q14451 532 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC5A12Q1EHB4 618 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 LINC01555Q8NAE3 123 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 OR2L8Q8NGY9 312 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 FLVCR1-AS1Q8TAF5 88 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 MAGEC3Q8TD91 643 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 RAD51AP1Q96B01 352 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC22A18Q96BI1 424 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 WBP1Q96G27 269 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC12A9Q9BXP2 914 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 IARS2Q9NSE4 1012 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 KLHL42Q9P2K6 505 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 CIDEBQ9UHD4 219 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC39A10Q9ULF5 831 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 CHMP2BQ9UQN3 213 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 NFS1Q9Y697 457 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 FER1L5A0AVI2 2057 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 COL6A6A6NMZ7 2263 aa16.65■□□□□ 0.26
CHMP1A-208ENST00000550102 MATN4O95460 622 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CCNYL3P0C7X3 344 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 ERVK-10P10266 1014 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CYP2A7P20853 494 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 PEBP1P30086 187 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 DLSTP36957 453 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CLCN7P51798 805 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 ACSBG2Q5FVE4 666 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 ZNF549Q6P9A3 640 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 PCSK4Q6UW60 755 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 C2CD4AQ8NCU7 369 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 SPATA4Q8NEY3 305 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 GIMAP7Q8NHV1 300 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 STARD8Q92502 1023 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 SLC39A7Q92504 469 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 N4BP2L2Q92802 583 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CERS2Q96G23 380 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CFAP36Q96G28 342 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 TCTN2Q96GX1 697 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 IL17FQ96PD4 163 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 FAM114A2Q9NRY5 505 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 ZC3H7BQ9UGR2 993 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 CROTQ9UKG9 612 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms