RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 MVB12BQ9H7P6 319 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 MRPL47Q9HD33 250 aaKnown RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CCM2LQ9NUG4 571 aaPredicted RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 FANCLQ9NW38 375 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 SPHK1Q9NYA1 384 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 EURLQ9NYK6 297 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 NXT1Q9UKK6 140 aaKnown RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 ICKQ9UPZ9 632 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 MRPS2Q9Y399 296 aaKnown RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CCDC88CQ9P219 2028 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 NBEAL1Q6ZS30 2694 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CACNA1CQ13936 2221 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 A0A0J9YY10 115 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 IFRD1O00458 451 aaPredicted RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 DDX3XO00571 662 aaKnown RBP eCLIP8.53□□□□□ -1.042e-15■■■■■ 30.2
UBE2N-203ENST00000549490 ADAM10O14672 748 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 MAP2K7O14733 419 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 DSCR3O14972 297 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 BMP10O95393 424 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 SERPINA7P05543 415 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 TPM2P07951 284 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 FOSL1P15407 271 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 FDXRP22570 491 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 PDHA2P29803 388 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 OR1D4P47884 311 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 ARSFP54793 590 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 CACNG1Q06432 222 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 KLC1Q07866 573 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 BOP1Q14137 746 aaKnown RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 PTPRCAPQ14761 206 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 ATG9BQ674R7 924 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 UNC5AQ6ZN44 842 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 ZNF571Q7Z3V5 609 aaPredicted RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 TMEM200AQ86VY9 491 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 MCATQ8IVS2 390 aaKnown RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 DNAAF3Q8N9W5 541 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 KCTD6Q8NC69 237 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 SUN3Q8TAQ9 357 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 FAF2Q96CS3 445 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 GPR137Q96N19 417 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 DMRTA2Q96SC8 542 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 ZNF670Q9BS34 389 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
UBE2N-203ENST00000549490 UBP1Q9NZI7 540 aa8.53□□□□□ -1.04
UBE2N-203ENST00000549490 ANKRD12Q6UB98 2062 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 NSG1A0A0A6YYJ2 146 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 LOC285095A0A1B0GVY8 99 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 OR5H15A6NDH6 313 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 LGALS16A8MUM7 142 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 BHMG1C9JSJ3 638 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 FAM227AF5H4B4 570 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 ZNHIT1O43257 154 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 WFS1O76024 890 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 ZRANB2O95218 330 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CELA2AP08217 269 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CHRM5P08912 532 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 TPBGLP0DKB5 382 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 MYBL1P10243 752 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 COX6A1P12074 109 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 MCM3P25205 808 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 NSG1P42857 185 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 SSR1P43307 286 aaKnown RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CHRNA4P43681 627 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CD151P48509 253 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CARSP49589 748 aaKnown RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 PRLHRP49683 370 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 FANCCQ00597 558 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 UBXN1Q04323 297 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 FOLH1Q04609 750 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 SKOR2Q2VWA4 1001 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 ZNF658BQ4V348 819 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 SIRPB2Q5JXA9 342 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 HIBCHQ6NVY1 386 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 C3P1Q6ZMU1 363 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 Q71RC1 249 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 NDUFAF7Q7L592 441 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 TAOK1Q7L7X3 1001 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 DOLPP1Q86YN1 238 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 CPNE8Q86YQ8 564 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 PRSS58Q8IYP2 241 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 DTWD1Q8N5C7 304 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 METTL27Q8N6F8 245 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 AMER2Q8N7J2 671 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 DENND1AQ8TEH3 1009 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 AGAP11Q8TF27 550 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 TFGQ92734 400 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 NINJ1Q92982 152 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 ERGIC2Q96RQ1 377 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 ZNF559Q9BR84 538 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.05
UBE2N-203ENST00000549490 HAUS4Q9H6D7 363 aa8.52□□□□□ -1.05
UBE2N-203ENST00000549490 COG4Q9H9E3 785 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms