RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR4L1Q8NH43 312 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 PEX13Q92968 403 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 GBP5Q96PP8 586 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 DHRS4Q9BTZ2 278 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 MENTQ9BUN1 341 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 NUDT9Q9BW91 350 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 AP1M1Q9BXS5 423 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 RAB6BQ9NRW1 208 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 PADI2Q9Y2J8 665 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 ZSCAN9O15535 394 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 AGXTP21549 392 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 CSE1LP55060 971 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 KIR2DS3Q14952 304 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 NLRP9Q7RTR0 991 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 RAB43Q86YS6 212 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 TMEM102Q8N9M5 508 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 LINC01555Q8NAE3 123 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 PROKR1Q8TCW9 393 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 N4BP2L2Q92802 583 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 SGSM3Q96HU1 749 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 SPRTNQ9H040 489 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 MARCH4Q9P2E8 410 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 ZNF451Q9Y4E5 1061 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 PCDHGB7Q9Y5F8 929 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 AP1M2Q9Y6Q5 423 aa16.77■□□□□ 0.28
CHMP1A-205ENST00000548650 TTLL8A6PVC2 850 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 GPC4O75487 556 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 APRTP07741 180 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 RAB28P51157 221 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 PRAMEP78395 509 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 SNX1Q13596 522 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 GRB7Q14451 532 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 SIX1Q15475 284 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 FASTKD1Q53R41 847 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 C1orf189Q5VU69 101 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 MED25Q71SY5 747 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 LDB1Q86U70 411 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 DCUN1D3Q8IWE4 304 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 FAM20CQ8IXL6 584 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 DNAJC22Q8N4W6 341 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 PPHLN1Q8NEY8 458 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 OR6P1Q8NGX9 317 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 CPT1CQ8TCG5 803 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 TTC1Q99614 292 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 C17orf62Q9BQA9 187 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 TSGA10Q9BZW7 698 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 EIF2B3Q9NR50 452 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 PAK5Q9P286 719 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 DHCR7Q9UBM7 475 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 GUCA1BQ9UMX6 200 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 SRPK3Q9UPE1 567 aa16.76■□□□□ 0.27
CHMP1A-205ENST00000548650 HIVEP3Q5T1R4 2406 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 IQCF5A8MTL0 148 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ISM1B1AKI9 464 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 F8W8V4 182 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ZNF185O15231 689 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 KDM1AO60341 852 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 CNOT3O75175 753 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ZSCAN5DPP0CG00 497 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 MAGP20916 626 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 OTX2P32243 289 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 GCGRP47871 477 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 RRADP55042 308 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 HSPA14Q0VDF9 509 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 KYNUQ16719 465 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 PRR30Q53SZ7 412 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 AARS2Q5JTZ9 985 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 UNC5DQ6UXZ4 953 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ZNF655Q8N720 491 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 CCDC89Q8N998 374 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 Q8NA96 180 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 GALNT11Q8NCW6 608 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ASZ1Q8WWH4 475 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 CATSPERZQ9NTU4 200 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 GPR83Q9NYM4 423 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 CIDEBQ9UHD4 219 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 PLCL2Q9UPR0 1127 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 MAP4K5Q9Y4K4 846 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 ICE1Q9Y2F5 2266 aa16.75■□□□□ 0.27
CHMP1A-205ENST00000548650 DPM1O60762 260 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 GNLYP22749 145 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 AOAHP28039 575 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 RPL22P35268 128 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 FOLR3P41439 243 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 FOXL2P58012 376 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 SLC9A5Q14940 896 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 SLC6A19Q695T7 634 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 JMJD6Q6NYC1 403 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 TMEM151BQ8IW70 566 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 EFCAB3Q8N7B9 438 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 LMNTD1Q8N9Z9 388 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 OR2Y1Q8NGV0 311 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 IL17FQ96PD4 163 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 SMAD5Q99717 465 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms