RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SPESP1Q6UW49 350 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 ELMO2Q96JJ3 720 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 IL17FQ96PD4 163 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 OR2A14Q96R47 310 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 NDNQ99608 321 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 PITPNM3Q9BZ71 974 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 SPRY4Q9C004 299 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 TWSG1Q9GZX9 223 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 SAYSD1Q9NPB0 183 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 WDR70Q9NW82 654 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 DHRS7Q9Y394 339 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 PTPRQQ9UMZ3 2332 aa18.13■□□□□ 0.49
PRPF40B-206ENST00000547764 EIF3HO15372 352 aaKnown RBP eCLIP18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 FGF5P12034 268 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 ST6GAL1P15907 406 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 UGT2B7P16662 529 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 CD9P21926 228 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 TIAL1Q01085 375 aaKnown RBP eCLIP18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 CAV1Q03135 178 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 TUBB3Q13509 450 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 CUL1Q13616 776 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 TUBB2AQ13885 445 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 TTLL9Q3SXZ7 439 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 CCSMST1Q4G0I0 132 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 ZDHHC24Q6UX98 284 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 GALNT7Q86SF2 657 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 LMNTD1Q8N9Z9 388 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 LINC01555Q8NAE3 123 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 FLVCR1-AS1Q8TAF5 88 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 FBXO25Q8TCJ0 367 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 CD200R1Q8TD46 325 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 PYROXD1Q8WU10 500 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 INPP5DQ92835 1189 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 RAD51AP1Q96B01 352 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 TUBB2BQ9BVA1 445 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 KLHL25Q9H0H3 589 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 SOHLH2Q9NX45 425 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 MOCS1Q9NZB8 636 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 PILRAQ9UKJ1 303 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 BTRCQ9Y297 605 aa18.12■□□□□ 0.49
PRPF40B-206ENST00000547764 ESYT3A0FGR9 886 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 KRT87PA6NCN2 255 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 VPS26AO75436 327 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 STK17BO94768 372 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 PVRP15151 417 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 PEBP1P30086 187 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 CCNFP41002 786 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 ACY1Q03154 408 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 MGAT5Q09328 741 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 KIR2DS3Q14952 304 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 RBM20Q5T481 1227 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 TMTC4Q5T4D3 741 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 CYB5D1Q6P9G0 228 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 CAPN12Q6ZSI9 719 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 NEK10Q6ZWH5 1172 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 TRIM73Q86UV7 250 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 PPP1R3BQ86XI6 285 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 MMGT1Q8N4V1 131 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 C2orf73Q8N5S3 287 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 OR2L8Q8NGY9 312 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 NKD1Q969G9 470 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 RNF31Q96EP0 1072 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 TRAPPC9Q96Q05 1148 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 CPNE5Q9HCH3 593 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 PDE7BQ9NP56 450 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 FGF21Q9NSA1 209 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 RARRES3Q9UL19 164 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 SLC39A10Q9ULF5 831 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 LHX6Q9UPM6 363 aa18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 TMEM184BQ9Y519 407 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-206ENST00000547764 ISM1B1AKI9 464 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 RAD1O60671 282 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 ZNF28P17035 718 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 UCNP55089 124 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 CDKN2DP55273 166 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 TMPRSS3P57727 454 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 TUBB4BP68371 445 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 SRSF6Q13247 344 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 GPR19Q15760 415 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 CYHR1Q6ZMK1 362 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 TIPARPQ7Z3E1 657 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 RASGRP3Q8IV61 690 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 PALM2Q8IXS6 379 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 CPNE9Q8IYJ1 553 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 NOA1Q8NC60 698 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 MNS1Q8NEH6 495 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 MAGEC3Q8TD91 643 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 CCNL2Q96S94 520 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 ULBP3Q9BZM4 244 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 PRORYQ9H606 182 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 TAS2R13Q9NYV9 303 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 ZFATQ9P243 1243 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 TRMT6Q9UJA5 497 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 PSAT1Q9Y617 370 aa18.1■□□□□ 0.49
PRPF40B-206ENST00000547764 CTAGE15A4D2H0 777 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 ARHGEF33A8MVX0 844 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms